#Line number RuleID ViolationType Message Line #------------ # GAF Parser ERROR count: 0 #------------ # GAF Parser WARNING count: 50 46 WARNING Repairing qualifier 'contributes_to' from: Contributes_to UniProtKB P0A6F1 carA Contributes_to GO:0004088 PMID:1827118 IMP F gene taxon:83333 20090223 EcoliWiki 51 WARNING Repairing qualifier 'contributes_to' from: Contributes_to UniProtKB P00968 carB Contributes_to GO:0004088 PMID:14718657 IDA F gene taxon:83333 20120615 EcoliWiki 56 WARNING Repairing qualifier 'contributes_to' from: Contributes_to UniProtKB P00968 carB Contributes_to GO:0004088 PMID:1737023 IGI EcoliWiki:carA F gene taxon:83333 20090122 EcoliWiki 183 WARNING Repairing qualifier 'contributes_to' from: Contributes_to UniProtKB P06959 aceF Contributes_to GO:0004738 PMID:3903169 IDA F gene taxon:83333 20091016 EcoliWiki 351 WARNING Repairing qualifier 'contributes_to' from: Contributes_to UniProtKB P0ACF4 hupB Contributes_to GO:0003677 PMID:10551881 IDA F gene taxon:83333 20100507 EcoliWiki 637 WARNING Repairing qualifier 'contributes_to' from: Contributes_to UniProtKB P0A6Y1 ihfB Contributes_to GO:0043565 PMID:10551881 IDA F gene taxon:83333 20100507 EcoliWiki 765 WARNING Repairing qualifier 'contributes_to' from: Contributes_to UniProtKB P76014 dhaL Contributes_to GO:0016740 PMID:11350937 IDA F gene taxon:83333 20110715 EcoliWiki 784 WARNING Repairing qualifier 'contributes_to' from: Contributes_to UniProtKB P0A877 trpA Contributes_to GO:0004834 PMID:8463331 IDA F gene taxon:83333 20090818 EcoliWiki 790 WARNING Repairing qualifier 'contributes_to' from: Contributes_to UniProtKB P0A879 trpB Contributes_to GO:0004834 PMID:8325869 IDA F gene taxon:83333 20090824 EcoliWiki 925 WARNING Repairing qualifier 'contributes_to' from: Contributes_to UniProtKB P0AGD3 sodB Contributes_to GO:0004784 PMID:3022287 IMP F gene taxon:83333 20090316 EcoliWiki 945 WARNING Repairing qualifier 'contributes_to' from: Contributes_to UniProtKB P0A6X7 ihfA Contributes_to GO:0043565 PMID:10551881 IDA F gene taxon:83333 20100507 EcoliWiki 1124 WARNING Repairing qualifier 'contributes_to' from: Contributes_to UniProtKB P00452 nrdA Contributes_to GO:0004748 PMID:13973714 IDA F gene taxon:83333 20120615 EcoliWiki 1127 WARNING Repairing qualifier 'contributes_to' from: Contributes_to UniProtKB P69924 nrdB Contributes_to GO:0004748 PMID:13973714 IDA F gene taxon:83333 20080917 EcoliWiki 1128 WARNING Repairing qualifier 'contributes_to' from: Contributes_to UniProtKB P69924 nrdB Contributes_to GO:0004748 PMID:13973714 IDA F gene taxon:83333 20120615 EcoliWiki 1148 WARNING Repairing qualifier 'contributes_to' from: Contributes_to UniProtKB P0AFF0 nuoN Contributes_to GO:0003954 PMID:3122832 IDA F gene taxon:83333 20080419 EcoliWiki 1151 WARNING Repairing qualifier 'contributes_to' from: Contributes_to UniProtKB P0AFE8 nuoM Contributes_to GO:0003954 PMID:3122832 IDA F gene taxon:83333 20080419 EcoliWiki 1154 WARNING Repairing qualifier 'contributes_to' from: Contributes_to UniProtKB P33607 nuoL Contributes_to GO:0003954 PMID:3122832 IDA F gene taxon:83333 20080419 EcoliWiki 1157 WARNING Repairing qualifier 'contributes_to' from: Contributes_to UniProtKB P0AFE4 nuoK Contributes_to GO:0003954 PMID:3122832 IDA F gene taxon:83333 20080419 EcoliWiki 1160 WARNING Repairing qualifier 'contributes_to' from: Contributes_to UniProtKB P0AFE0 nuoJ Contributes_to GO:0003954 PMID:3122832 IDA F gene taxon:83333 20080419 EcoliWiki 1164 WARNING Repairing qualifier 'contributes_to' from: Contributes_to UniProtKB P0AFD6 nuoI Contributes_to GO:0003954 PMID:3122832 IDA F gene taxon:83333 20080722 EcoliWiki 1168 WARNING Repairing qualifier 'contributes_to' from: Contributes_to UniProtKB P0AFD4 nuoH Contributes_to GO:0003954 PMID:3122832 IDA F gene taxon:83333 20080419 EcoliWiki 1173 WARNING Repairing qualifier 'contributes_to' from: Contributes_to UniProtKB P33602 nuoG Contributes_to GO:0003954 PMID:3122832 IDA F gene taxon:83333 20080722 EcoliWiki 1176 WARNING Repairing qualifier 'contributes_to' from: Contributes_to UniProtKB P33602 nuoG Contributes_to GO:0010181 PMID:7607227 IDA F gene taxon:83333 20080722 EcoliWiki 1179 WARNING Repairing qualifier 'contributes_to' from: Contributes_to UniProtKB P31979 nuoF Contributes_to GO:0003954 PMID:3122832 IDA F gene taxon:83333 20080722 EcoliWiki 1181 WARNING Repairing qualifier 'contributes_to' from: Contributes_to UniProtKB P31979 nuoF Contributes_to GO:0010181 PMID:7607227 IDA F gene taxon:83333 20080722 EcoliWiki 1185 WARNING Repairing qualifier 'contributes_to' from: Contributes_to UniProtKB P0AFD1 nuoE Contributes_to GO:0003954 PMID:3122832 IDA F gene taxon:83333 20080419 EcoliWiki 1186 WARNING Repairing qualifier 'contributes_to' from: Contributes_to UniProtKB P0AFD1 nuoE Contributes_to GO:0010181 PMID:7607227 IDA F gene taxon:83333 20080419 EcoliWiki 1190 WARNING Repairing qualifier 'contributes_to' from: Contributes_to UniProtKB P33599 nuoC Contributes_to GO:0003954 PMID:3122832 IDA F gene taxon:83333 20080722 EcoliWiki 1195 WARNING Repairing qualifier 'contributes_to' from: Contributes_to UniProtKB P0AFC7 nuoB Contributes_to GO:0003954 PMID:3122832 IDA F gene taxon:83333 20080722 EcoliWiki 1198 WARNING Repairing qualifier 'contributes_to' from: Contributes_to UniProtKB P0AFC3 nuoA Contributes_to GO:0003954 PMID:3122832 IDA F gene taxon:83333 20100621 EcoliWiki 1360 WARNING Repairing qualifier 'contributes_to' from: Contributes_to UniProtKB P0AGD7 ffh Contributes_to GO:0003924 PMID:7612669 IDA F gene taxon:83333 20080805 EcoliWiki 1378 WARNING Repairing qualifier 'contributes_to' from: Contributes_to UniProtKB P39452 nrdE Contributes_to GO:0004748 PMID:7809142 IGI EcoliWiki:nrdA|EcoliWiki:nrdB F gene taxon:83333 20110815 EcoliWiki 1382 WARNING Repairing qualifier 'contributes_to' from: Contributes_to UniProtKB P37146 nrdF Contributes_to GO:0004748 PMID:7809142 IGI EcoliWiki:nrdA|EcoliWiki:nrdB F gene taxon:83333 20110815 EcoliWiki 1416 WARNING Repairing qualifier 'contributes_to' from: Contributes_to UniProtKB P23845 cysN Contributes_to GO:0004781 PMID:2828368 IDA F gene taxon:83333 20110815 EcoliWiki 1420 WARNING Repairing qualifier 'contributes_to' from: Contributes_to UniProtKB P21156 cysD Contributes_to GO:0004781 PMID:2828368 IDA F gene taxon:83333 20100510 EcoliWiki 1444 WARNING Repairing qualifier 'contributes_to' from: Contributes_to UniProtKB P04993 recD Contributes_to GO:0004386 PMID:1618858 IDA F gene taxon:83333 20090811 EcoliWiki 1448 WARNING Repairing qualifier 'contributes_to' from: Contributes_to UniProtKB P04993 recD Contributes_to GO:0008854 PMID:1618858 IDA F gene taxon:83333 20090811 EcoliWiki 1543 WARNING Repairing qualifier 'contributes_to' from: Contributes_to UniProtKB P0AFI2 parC Contributes_to GO:0003916 PMID:1334483 IDA F gene taxon:83333 20081208 EcoliWiki 1546 WARNING Repairing qualifier 'contributes_to' from: Contributes_to UniProtKB P0AFI2 parC Contributes_to GO:0003918 PMID:8227000 IDA F gene taxon:83333 20081208 EcoliWiki 1768 WARNING Repairing qualifier 'contributes_to' from: Contributes_to UniProtKB P22731 livF Contributes_to GO:0015190 PMID:2195019 IDA F gene taxon:83333 20100507 EcoliWiki 1937 WARNING Repairing qualifier 'contributes_to' from: Contributes_to UniProtKB P0A6E6 atpC Contributes_to GO:0046933 PMID:2863270 IDA F gene taxon:83333 20080731 EcoliWiki 1940 WARNING Repairing qualifier 'contributes_to' from: Contributes_to UniProtKB P0ABB4 atpD Contributes_to GO:0046933 PMID:2863270 IDA F gene taxon:83333 20080731 EcoliWiki 1942 WARNING Repairing qualifier 'contributes_to' from: Contributes_to UniProtKB P0ABA6 atpG Contributes_to GO:0046933 PMID:2863270 IDA F gene taxon:83333 20080731 EcoliWiki 1945 WARNING Repairing qualifier 'contributes_to' from: Contributes_to UniProtKB P0ABB0 atpA Contributes_to GO:0046961 PMID:2863270 IDA F gene taxon:83333 20110815 EcoliWiki 1946 WARNING Repairing qualifier 'contributes_to' from: Contributes_to UniProtKB P0ABA4 atpH Contributes_to GO:0046933 PMID:2863270 IDA F gene taxon:83333 20080731 EcoliWiki 1949 WARNING Repairing qualifier 'contributes_to' from: Contributes_to UniProtKB P0ABA0 atpF Contributes_to GO:0046961 PMID:2863271 IMP F gene taxon:83333 20100621 EcoliWiki 1952 WARNING Repairing qualifier 'contributes_to' from: Contributes_to UniProtKB P68699 atpE Contributes_to GO:0046961 PMID:2863271 IMP F gene taxon:83333 20100621 EcoliWiki 1955 WARNING Repairing qualifier 'contributes_to' from: Contributes_to UniProtKB P0AB98 atpB Contributes_to GO:0046961 PMID:2863271 IMP F gene taxon:83333 20110815 EcoliWiki 2228 WARNING Repairing qualifier 'contributes_to' from: Contributes_to UniProtKB P0A9N8 nrdG Contributes_to GO:0004748 PMID:8954104 IMP F gene taxon:83333 20120615 EcoliWiki 2232 WARNING Repairing qualifier 'contributes_to' from: Contributes_to UniProtKB P28903 nrdD Contributes_to GO:0004748 PMID:8954104 IMP F gene taxon:83333 20120615 EcoliWiki #------------ #------------ # Validation for #26178 annotations in 26198 lines #------------ #Line number RuleID ViolationType Message Line #------------ # GO_AR:0000008 No annotations should be made to uninformative high level terms Warning count: 91 409 GO_AR:0000008 Warning Do not annotate to: GO:0006810 'transport' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate UniProtKB P23895 emrE GO:0006810 PMID:12356478 IDA P gene taxon:83333 20081201 EcoliWiki 669 GO_AR:0000008 Warning Do not annotate to: GO:0006810 'transport' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate UniProtKB P0A910 ompA GO:0006810 PMID:10636850 IDA P gene taxon:83333 20090309 EcoliWiki 883 GO_AR:0000008 Warning Do not annotate to: GO:0042710 'biofilm formation' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate UniProtKB P0AFS5 tqsA GO:0042710 PMID:16385049 IMP P gene taxon:83333 20110607 EcoliWiki 884 GO_AR:0000008 Warning Do not annotate to: GO:0006810 'transport' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate UniProtKB P0AFS5 tqsA GO:0006810 PMID:16385049 IMP P gene taxon:83333 20110607 EcoliWiki 929 GO_AR:0000008 Warning Do not annotate to: GO:0005215 'transporter activity' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate UniProtKB P37340 mdtK GO:0005215 PMID:18591276 IDA F gene taxon:83333 20120612 EcoliWiki 1266 GO_AR:0000008 Warning Do not annotate to: GO:0006810 'transport' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate UniProtKB P45562 xapB GO:0006810 PMID:7559336 ISA EcoliWiki:NupG P gene taxon:83333 20081110 EcoliWiki 1654 GO_AR:0000008 Warning Do not annotate to: GO:0006810 'transport' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate UniProtKB P46481 aaeB GO:0006810 PMID:15489430 IMP P gene taxon:83333 20090127 EcoliWiki 1657 GO_AR:0000008 Warning Do not annotate to: GO:0006810 'transport' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate UniProtKB P46482 aaeA GO:0006810 PMID:15489430 IGI EcoliWiki:aaeB P gene taxon:83333 20090127 EcoliWiki 1732 GO_AR:0000008 Warning Do not annotate to: GO:0006810 'transport' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate UniProtKB P34749 hofQ GO:0006810 PMID:19011021 IMP P gene taxon:83333 20100506 EcoliWiki 1743 GO_AR:0000008 Warning Do not annotate to: GO:0071229 'cellular response to acid chemical' The term is considered to high level, as marked via the subset tag: gocheck_do_not_manually_annotate UniProtKB P0AEJ4 envZ GO:0071229 PMID:20380141 IMP P gene taxon:83333 20100426 EcoliWiki 1800 GO_AR:0000008 Warning Do not annotate to: GO:0005215 'transporter activity' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate UniProtKB P37637 mdtF GO:0005215 PMID:11914367 IMP F gene taxon:83333 20100507 EcoliWiki 2127 GO_AR:0000008 Warning Do not annotate to: GO:0006810 'transport' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate UniProtKB P0AEX9 malE GO:0006810 PMID:2155217 IGI EcoliWiki:lamB|EcoliWiki:malF|EcoliWiki:malG|EcoliWiki:malK P gene taxon:83333 20110815 EcoliWiki 2129 GO_AR:0000008 Warning Do not annotate to: GO:0005215 'transporter activity' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate UniProtKB P0AEX9 malE GO:0005215 PMID:2155217 IGI EcoliWiki:lamB|EcoliWiki:malF|EcoliWiki:malG|EcoliWiki:malK F gene taxon:83333 20110815 EcoliWiki 2158 GO_AR:0000008 Warning Do not annotate to: GO:0042710 'biofilm formation' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate UniProtKB P14407 fumB GO:0042710 PMID:16385049 IMP P gene taxon:83333 20110607 EcoliWiki 3475 GO_AR:0000008 Warning Do not annotate to: GO:0016049 'cell growth' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate UniProtKB P0ABD8 accB GO:0016049 PMID:11956202 IMP P biotin carboxyl carrier protein accB|fabE|b3255|ECK3242 protein taxon:83333 20161026 CAFA PR:P0ABD8 3640 GO_AR:0000008 Warning Do not annotate to: GO:0006810 'transport' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate UniProtKB Q46817 ghxQ GO:0006810 PMID:10986234 ISS P guanine/hypoxanthine transporter GhxQ ghxQ|b2885 (obsolete)|ygfR|b2884 (obsolete)|ygfQ|b4464|ECK2880 protein taxon:83333 20080818 EcoCyc PR:Q46817 3641 GO_AR:0000008 Warning Do not annotate to: GO:0005215 'transporter activity' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate UniProtKB Q46817 ghxQ GO:0005215 PMID:10986234 ISS F guanine/hypoxanthine transporter GhxQ ghxQ|b2885 (obsolete)|ygfR|b2884 (obsolete)|ygfQ|b4464|ECK2880 protein taxon:83333 20080818 EcoCyc PR:Q46817 4157 GO_AR:0000008 Warning Do not annotate to: GO:0048518 'positive regulation of biological process' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate UniProtKB P0A894 rapZ GO:0048518 PMID:17824929 IMP P RNase adaptor protein rapZ|yhbJ|b3205|ECK3194 protein taxon:83333 20071001 EcoCyc PR:P0A894 4546 GO_AR:0000008 Warning Do not annotate to: GO:0042710 'biofilm formation' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate UniProtKB P0ACL7 lldR GO:0042710 PMID:14731270 IMP P DNA-binding transcriptional dual regulator LldR lldR|lct|lctR|b3604|ECK3594 protein taxon:83333 20120501 EcoCyc PR:P0ACL7 4806 GO_AR:0000008 Warning Do not annotate to: GO:0005215 'transporter activity' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate UniProtKB P37662 yhjX GO:0005215 PMID:23222720 RCA F putative pyruvate transporter yhjX|b3547|ECK3534 protein taxon:83333 20130113 EcoCyc PR:P37662 5076 GO_AR:0000008 Warning Do not annotate to: GO:0005215 'transporter activity' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate UniProtKB P0CE44 uidB GO:0005215 PMID:15774881 IDA F glucuronide:H+ symporter uidB|gusB|uidP|b1616|ECK1611 protein taxon:83333 20130425 EcoCyc PR:P0CE45 5594 GO_AR:0000008 Warning Do not annotate to: GO:0008152 'metabolic process' The term is considered to high level, as marked via the subset tag: gocheck_do_not_manually_annotate UniProtKB P76440 preT GO:0008152 PMID:12952533 ISS P NAD-dependent dihydropyrimidine dehydrogenase subunit PreT preT|yeiT|b2146|ECK2139 protein taxon:83333 20061219 EcoCyc PR:P76440 6003 GO_AR:0000008 Warning Do not annotate to: GO:0042710 'biofilm formation' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate UniProtKB P0DP21 rpnD GO:0042710 PMID:16385049 IMP P recombination-promoting nuclease RpnD, N-terminal fragment rpnD|yjiP|b4338|ECK4329 protein taxon:83333 20061121 EcoCyc 6607 GO_AR:0000008 Warning Do not annotate to: GO:0006928 'movement of cell or subcellular component' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate UniProtKB P33352 yehP GO:0006928 PMID:17122336 IMP P VWA domain-containing protein YehP yehP|b2121|ECK2113 protein taxon:83333 20070221 EcoCyc PR:P33352 7425 GO_AR:0000008 Warning Do not annotate to: GO:0006810 'transport' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate UniProtKB P31064 yedE GO:0006810 PMID:25638258 RCA P putative selenium transporter yedE|b1929|ECK1928 protein taxon:83333 20170403 EcoCyc PR:P31064 8096 GO_AR:0000008 Warning Do not annotate to: GO:0042710 'biofilm formation' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate UniProtKB P0ADT2 ygiB GO:0042710 PMID:14731270 IMP P DUF1190 domain-containing protein YgiB ygiB|b3037|ECK3028 protein taxon:83333 20121106 EcoCyc PR:P0ADT2 8181 GO_AR:0000008 Warning Do not annotate to: GO:0001101 'response to acid chemical' The term is considered to high level, as marked via the subset tag: gocheck_do_not_manually_annotate UniProtKB P36560 asr GO:0001101 PMID:10094685 IEP P acid shock protein asr|b1597|ECK1592 protein taxon:83333 20080808 EcoCyc PR:P36560 8182 GO_AR:0000008 Warning Do not annotate to: GO:0001101 'response to acid chemical' The term is considered to high level, as marked via the subset tag: gocheck_do_not_manually_annotate UniProtKB P36560 asr GO:0001101 PMID:12670971 IMP P acid shock protein asr|b1597|ECK1592 protein taxon:83333 20080808 EcoCyc PR:P36560 8418 GO_AR:0000008 Warning Do not annotate to: GO:0042710 'biofilm formation' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate UniProtKB P17115 gutQ GO:0042710 PMID:16385049 IMP P D-arabinose 5-phosphate isomerase GutQ gutQ|srlQ|b2708|ECK2703 protein taxon:83333 20061121 EcoCyc PR:P17115 9091 GO_AR:0000008 Warning Do not annotate to: GO:0006928 'movement of cell or subcellular component' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate UniProtKB P30176 ybiA GO:0006928 PMID:17122336 IMP P conserved protein YbiA ybiA|b0798|ECK0787 protein taxon:83333 20080410 EcoCyc PR:P30176 9580 GO_AR:0000008 Warning Do not annotate to: GO:0042710 'biofilm formation' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate UniProtKB P0AEB7 yoaB GO:0042710 PMID:14731270 IMP P RutC family protein YoaB yoaB|b1809|ECK1807 protein taxon:83333 20120618 EcoCyc PR:P0AEB7 10368 GO_AR:0000008 Warning Do not annotate to: GO:0042710 'biofilm formation' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate UniProtKB P0ADS9 yggN GO:0042710 PMID:14731270 IMP P putative EcfF yggN|ecfF|b2958|ECK2953 protein taxon:83333 20120507 EcoCyc PR:P0ADS9 10925 GO_AR:0000008 Warning Do not annotate to: GO:0042710 'biofilm formation' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate UniProtKB P75876 rlmI GO:0042710 PMID:16385049 IMP P 23S rRNA m5C1962 methyltransferase rlmI|yccW|b0967|ECK0958 protein taxon:83333 20061121 EcoCyc PR:P75876 11340 GO_AR:0000008 Warning Do not annotate to: GO:0006810 'transport' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate UniProtKB P0A9U3 ybiT GO:0006810 PMID:11916677 RCA P ABC transporter ATP-binding protein YbiT ybiT|b0820|ECK0810 protein taxon:83333 20110221 EcoCyc PR:P0A9U3 11645 GO_AR:0000008 Warning Do not annotate to: GO:0005215 'transporter activity' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate UniProtKB P0AE74 citT GO:0005215 PMID:9696764 IDA F citrate:succinate antiporter citT|ybdS|b0612|ECK0605 protein taxon:83333 20130426 EcoCyc PR:P0AE74 11687 GO_AR:0000008 Warning Do not annotate to: GO:0042710 'biofilm formation' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate UniProtKB P05847 ttdA GO:0042710 PMID:16385049 IMP P L(+)-tartrate dehydratase subunit alpha ttdA|ygjA|b3061|ECK3051 protein taxon:83333 20061121 EcoCyc PR:P05847 11760 GO_AR:0000008 Warning Do not annotate to: GO:0006928 'movement of cell or subcellular component' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate UniProtKB P75962 ymfA GO:0006928 PMID:17122336 IMP P putative inner membrane protein ymfA|b1122|ECK1108 protein taxon:83333 20080410 EcoCyc PR:P75962 11901 GO_AR:0000008 Warning Do not annotate to: GO:0006928 'movement of cell or subcellular component' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate UniProtKB P76111 ydcZ GO:0006928 PMID:17122336 IMP P putative inner membrane protein ydcZ|b1447|ECK1441 protein taxon:83333 20080408 EcoCyc PR:P76111 12126 GO_AR:0000008 Warning Do not annotate to: GO:0006810 'transport' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate UniProtKB P76474 arnF GO:0006810 PMID:17928292 IMP P undecaprenyl-phosphate-alpha-L-Ara4N flippase - ArnF subunit arnF|yfbJ|b2258|ECK2252 protein taxon:83333 20080801 EcoCyc PR:P76474 12784 GO_AR:0000008 Warning Do not annotate to: GO:0065007 'biological regulation' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate UniProtKB P0AFW4 rnk GO:0065007 PMID:8596442 IMP P nucleoside diphosphate kinase regulator rnk|b0610|ECK0603 protein taxon:83333 20110525 EcoCyc PR:P0AFW4 12791 GO_AR:0000008 Warning Do not annotate to: GO:0043492 'ATPase activity, coupled to movement of substances' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate UniProtKB P75796 gsiA GO:0043492 PMID:16109926 IDA F glutathione ABC transporter ATP binding subunit GsiA gsiA|yliA|b0829|ECK0819 protein taxon:83333 20160731 EcoCyc PR:P75796 13734 GO_AR:0000008 Warning Do not annotate to: GO:0005622 'intracellular' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate UniProtKB P0AFB5 glnL GO:0005622 PMID:3536843 IDA C sensory histidine kinase NtrB glnL|glnR|ntrB|b3869|ECK3862 protein taxon:83333 20101021 EcoCyc PR:P0AFB5 13870 GO_AR:0000008 Warning Do not annotate to: GO:0006810 'transport' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate UniProtKB P77726 yajR GO:0006810 PMID:23950222 IDA P putative major facilitator superfamily transport protein YajR yajR|b0427|ECK0421 protein taxon:83333 20131002 EcoCyc PR:P77726 14221 GO_AR:0000008 Warning Do not annotate to: GO:0001101 'response to acid chemical' The term is considered to high level, as marked via the subset tag: gocheck_do_not_manually_annotate UniProtKB P0A9W6 ibaG GO:0001101 PMID:22534295 IEP P acid stress protein IbaG ibaG|yrbA|b3190|ECK3179 protein taxon:83333 20120510 EcoCyc PR:P0A9W6 14510 GO_AR:0000008 Warning Do not annotate to: GO:0043492 'ATPase activity, coupled to movement of substances' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate UniProtKB P15031 fecE GO:0043492 PMID:2651410 RCA F ferric citrate ABC transporter ATP binding subunit fecE|b4287|ECK4277 protein taxon:83333 20160711 EcoCyc PR:P15031 14777 GO_AR:0000008 Warning Do not annotate to: GO:0051338 'regulation of transferase activity' The term is considered to high level, as marked via the subset tag: gocheck_do_not_manually_annotate UniProtKB P0A8A4 ppsR GO:0051338 PMID:20044937 IDA P PEP synthetase regulatory protein ppsR|ydiA|b1703|ECK1701 protein taxon:83333 20100114 EcoCyc PR:P0A8A4 15077 GO_AR:0000008 Warning Do not annotate to: GO:0042710 'biofilm formation' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate UniProtKB P32139 yihR GO:0042710 PMID:16385049 IMP P putative aldose-1-epimerase YihR yihR|squR|b3879|ECK3872 protein taxon:83333 20061121 EcoCyc PR:P32139 15256 GO_AR:0000008 Warning Do not annotate to: GO:0008152 'metabolic process' The term is considered to high level, as marked via the subset tag: gocheck_do_not_manually_annotate UniProtKB P24203 yjiA GO:0008152 PMID:24449932 IDA P P-loop guanosine triphosphatase yjiA|b4352|ECK4342 protein taxon:83333 20140127 EcoCyc PR:P24203 15298 GO_AR:0000008 Warning Do not annotate to: GO:0042710 'biofilm formation' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate UniProtKB P0ABZ6 surA GO:0042710 PMID:18180259 IMP P peptidyl-prolyl cis-trans isomerase SurA surA|b0053|ECK0054 protein taxon:83333 20080630 EcoCyc PR:P0ABZ6 15519 GO_AR:0000008 Warning Do not annotate to: GO:0006928 'movement of cell or subcellular component' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate UniProtKB P0ADR0 yqaA GO:0006928 PMID:17122336 IMP P DedA family protein YqaA yqaA|b2689|ECK2684 protein taxon:83333 20080409 EcoCyc PR:P0ADR0 16105 GO_AR:0000008 Warning Do not annotate to: GO:0006810 'transport' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate UniProtKB P08194 glpT GO:0006810 PMID:14519998 IGI P sn-glycerol 3-phosphate:phosphate antiporter glpT|b2240|ECK2232 protein taxon:83333 20071107 EcoCyc PR:P08194 16106 GO_AR:0000008 Warning Do not annotate to: GO:0042710 'biofilm formation' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate UniProtKB P75993 ariR GO:0042710 PMID:17765265 IMP P regulator of acid resistance, influenced by indole ariR|ymgB|b1166|ECK1153 protein taxon:83333 20070925 EcoCyc PR:P75993 16236 GO_AR:0000008 Warning Do not annotate to: GO:0001101 'response to acid chemical' The term is considered to high level, as marked via the subset tag: gocheck_do_not_manually_annotate UniProtKB P24169 speF GO:0001101 PMID:1939141 IEP P ornithine decarboxylase, degradative speF|b0693|ECK0681 protein taxon:83333 20130514 EcoCyc PR:P24169 16278 GO_AR:0000008 Warning Do not annotate to: GO:0042710 'biofilm formation' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate UniProtKB P0AB40 bhsA GO:0042710 PMID:17293424 IMP P DUF1471 domain-containing multiple stress resistance outer membrane protein BhsA bhsA|ycfR|comC|b1112|ECK1098 protein taxon:83333 20070315 EcoCyc PR:P0AB40 16495 GO_AR:0000008 Warning Do not annotate to: GO:0042710 'biofilm formation' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate UniProtKB P75906 pgaB GO:0042710 PMID:15090514 IMP P poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase pgaB|hmsF|ycdR|b1023|ECK1013 protein taxon:83333 20080731 EcoCyc PR:P75906 16688 GO_AR:0000008 Warning Do not annotate to: GO:0001101 'response to acid chemical' The term is considered to high level, as marked via the subset tag: gocheck_do_not_manually_annotate UniProtKB P39297 bsmA GO:0001101 PMID:19833773 IMP P DUF1471 domain-containing putative lipoprotein BsmA bsmA|yjfO|b4189|ECK4185 protein taxon:83333 20091217 EcoCyc PR:P39297 16750 GO_AR:0000008 Warning Do not annotate to: GO:0006810 'transport' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate UniProtKB P37642 yhjD GO:0006810 PMID:18093093 IGI P putative lipid IV exporter family transporter YhjD yhjD|b3522|ECK3507 protein taxon:83333 20160518 EcoCyc PR:P37642 16751 GO_AR:0000008 Warning Do not annotate to: GO:0042710 'biofilm formation' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate UniProtKB P33997 alpA GO:0042710 PMID:16385049 IGI UniProtKB:P0AFS5 P CP4-57 prophage; DNA-binding transcriptional activator AlpA alpA|b2624|ECK2620 protein taxon:83333 20090714 EcoCyc PR:P33997 16752 GO_AR:0000008 Warning Do not annotate to: GO:0042710 'biofilm formation' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate UniProtKB P33997 alpA GO:0042710 PMID:16385049 IEP P CP4-57 prophage; DNA-binding transcriptional activator AlpA alpA|b2624|ECK2620 protein taxon:83333 20090714 EcoCyc PR:P33997 16961 GO_AR:0000008 Warning Do not annotate to: GO:0042710 'biofilm formation' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate UniProtKB P64442 yceO GO:0042710 PMID:16385049 IMP P DUF2770 domain-containing protein YceO yceO|b1058|ECK1043 protein taxon:83333 20061121 EcoCyc PR:P64442 16996 GO_AR:0000008 Warning Do not annotate to: GO:0006928 'movement of cell or subcellular component' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate UniProtKB P25889 preA GO:0006928 PMID:17122336 IMP P NAD-dependent dihydropyrimidine dehydrogenase subunit PreA preA|yeiA|b2147|ECK2140 protein taxon:83333 20061219 EcoCyc PR:P25889 16997 GO_AR:0000008 Warning Do not annotate to: GO:0008152 'metabolic process' The term is considered to high level, as marked via the subset tag: gocheck_do_not_manually_annotate UniProtKB P25889 preA GO:0008152 PMID:11574054 ISS P NAD-dependent dihydropyrimidine dehydrogenase subunit PreA preA|yeiA|b2147|ECK2140 protein taxon:83333 20061219 EcoCyc PR:P25889 17303 GO_AR:0000008 Warning Do not annotate to: GO:0051347 'positive regulation of transferase activity' The term is considered to high level, as marked via the subset tag: gocheck_do_not_manually_annotate UniProtKB P76194 sufE GO:0051347 PMID:12941942 IDA P sulfur acceptor for SufS cysteine desulfurase sufE|ynhA|b1679|ECK1675 protein taxon:83333 20131111 EcoCyc PR:P76194 17434 GO_AR:0000008 Warning Do not annotate to: GO:0051704 'multi-organism process' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate UniProtKB P0A6H1 clpX GO:0051704 PMID:18406325 IMP UniProtKB:P07636 P ATP-dependent Clp protease ATP-binding subunit ClpX clpX|lopC|b0438|ECK0432 protein taxon:83333 20160330 UniProtKB PR:P0A6H1 17798 GO_AR:0000008 Warning Do not annotate to: GO:0071229 'cellular response to acid chemical' The term is considered to high level, as marked via the subset tag: gocheck_do_not_manually_annotate UniProtKB P37630 yhiM GO:0071229 PMID:22327802 IMP P inner membrane protein with a role in acid resistance yhiM|b3491|ECK3476 protein taxon:83333 20120304 EcoCyc PR:P37630 17799 GO_AR:0000008 Warning Do not annotate to: GO:0071229 'cellular response to acid chemical' The term is considered to high level, as marked via the subset tag: gocheck_do_not_manually_annotate UniProtKB P37630 yhiM GO:0071229 PMID:12426343 IEP P inner membrane protein with a role in acid resistance yhiM|b3491|ECK3476 protein taxon:83333 20120304 EcoCyc PR:P37630 18063 GO_AR:0000008 Warning Do not annotate to: GO:0042710 'biofilm formation' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate UniProtKB P75994 ymgC GO:0042710 PMID:17765265 IMP P protein YmgC ymgC|b1167|ECK1154 protein taxon:83333 20070925 EcoCyc PR:P75994 18230 GO_AR:0000008 Warning Do not annotate to: GO:0042710 'biofilm formation' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate UniProtKB P14407 fumB GO:0042710 PMID:16385049 IMP P fumarase B fumB|b4122|ECK4115 protein taxon:83333 20061121 EcoCyc PR:P14407 18244 GO_AR:0000008 Warning Do not annotate to: GO:0006810 'transport' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate UniProtKB P69434 pgaA GO:0006810 PMID:18359807 IMP P partially N-deacetylated poly-beta-1,6-N-acetyl-D-glucosamine outer membrane porin pgaA|hmsH|ycdS|b1024|ECK1014 protein taxon:83333 20080731 EcoCyc PR:P69434 18246 GO_AR:0000008 Warning Do not annotate to: GO:0042710 'biofilm formation' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate UniProtKB P69434 pgaA GO:0042710 PMID:15090514 IMP P partially N-deacetylated poly-beta-1,6-N-acetyl-D-glucosamine outer membrane porin pgaA|hmsH|ycdS|b1024|ECK1014 protein taxon:83333 20080731 EcoCyc PR:P69434 18575 GO_AR:0000008 Warning Do not annotate to: GO:0006928 'movement of cell or subcellular component' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate UniProtKB P77804 ydgA GO:0006928 PMID:17122336 IMP P conserved protein YdgA ydgA|b1614|ECK1609 protein taxon:83333 20080409 EcoCyc PR:P77804 18581 GO_AR:0000008 Warning Do not annotate to: GO:0065007 'biological regulation' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate UniProtKB P0AEZ7 mltD GO:0065007 PMID:1663890 IMP P membrane-bound lytic murein transglycosylase D mltD|yafG|dniR|b0211|ECK0211 protein taxon:83333 20151130 EcoCyc PR:P0AEZ7 18597 GO_AR:0000008 Warning Do not annotate to: GO:0001101 'response to acid chemical' The term is considered to high level, as marked via the subset tag: gocheck_do_not_manually_annotate UniProtKB P37195 dctR GO:0001101 PMID:17259322 IMP P putative DNA-binding transcriptional regulator DctR dctR|yhiF|b3507|ECK3491 protein taxon:83333 20070214 EcoCyc PR:P37195 18735 GO_AR:0000008 Warning Do not annotate to: GO:0006928 'movement of cell or subcellular component' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate UniProtKB P76146 yneE GO:0006928 PMID:17122336 IMP P conserved inner membrane protein YneE yneE|b1520|ECK1513 protein taxon:83333 20070615 EcoCyc PR:P76146 18762 GO_AR:0000008 Warning Do not annotate to: GO:0005215 'transporter activity' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate UniProtKB P32137 yihP GO:0005215 PMID:8830272 RCA F putative 2,3-dihydroxypropane-1-sulfonate export protein yihP|b3877|ECK3870 protein taxon:83333 20140129 EcoCyc PR:P32137 18823 GO_AR:0000008 Warning Do not annotate to: GO:0006810 'transport' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate UniProtKB P42628 yhaO GO:0006810 PMID:24225317 RCA P putative D/L-serine transporter yhaO|dlsT|cutP|b3110|ECK3100 protein taxon:83333 20160706 EcoCyc PR:P42628 19616 GO_AR:0000008 Warning Do not annotate to: GO:0042710 'biofilm formation' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate UniProtKB Q46840 yghO GO:0042710 PMID:14731270 IMP P putative DNA-binding transcriptional regulator YghO yghO|b2981|ECK2976 protein taxon:83333 20110725 EcoCyc 19673 GO_AR:0000008 Warning Do not annotate to: GO:0006810 'transport' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate UniProtKB P0AFS5 tqsA GO:0006810 PMID:16385049 IMP P autoinducer 2 exporter tqsA|ydgG|b1601|ECK1596 protein taxon:83333 20100912 EcoCyc PR:P0AFS5 20085 GO_AR:0000008 Warning Do not annotate to: GO:0006810 'transport' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate UniProtKB Q47377 arnE GO:0006810 PMID:17928292 IMP P undecaprenyl-phosphate-alpha-L-Ara4N flippase - ArnE subunit arnE|yfbW|b4544|ECK2251 protein taxon:83333 20080801 EcoCyc PR:Q47377 20817 GO_AR:0000008 Warning Do not annotate to: GO:0042710 'biofilm formation' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate UniProtKB P0AF45 yjbE GO:0042710 PMID:16385049 IMP P uncharacterized protein YjbE yjbE|b4026|ECK4018 protein taxon:83333 20061121 EcoCyc PR:P0AF45 21512 GO_AR:0000008 Warning Do not annotate to: GO:0005215 'transporter activity' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate EcoGene EG12393 ttdT GO:0005215 PMID:21873635 IBA EcoGene:EG13538|PANTHER:PTN000032104 F L-tartrate/succinate antiporter UniProtKB:P39414|PTN000032131 protein taxon:83333 20170421 GO_Central 21688 GO_AR:0000008 Warning Do not annotate to: GO:0005215 'transporter activity' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate EcoGene EG11841 yihO GO:0005215 PMID:21873635 IBA EcoGene:EG10578|EcoGene:EG11658|EcoGene:EG11841|MGI:MGI:1923824|MGI:MGI:3583946|PANTHER:PTN000140373|UniProtKB:A6NFX1|UniProtKB:Q8NA29 F Putative sulfoquinovose importer UniProtKB:P32136|PTN000792849 protein taxon:83333 20181024 GO_Central 23305 GO_AR:0000008 Warning Do not annotate to: GO:0005215 'transporter activity' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate EcoGene EG13853 rutG GO:0005215 PMID:21873635 IBA EcoGene:EG12129|EcoGene:EG13853|MGI:MGI:1341903|MGI:MGI:1859682|PANTHER:PTN000122237|RGD:619875|RGD:619876|UniProtKB:B9VMA9|UniProtKB:Q3E7D0|UniProtKB:Q8GZD4|UniProtKB:Q9UGH3|UniProtKB:Q9UHI7 F Putative pyrimidine permease RutG UniProtKB:P75892|PTN000122482 protein taxon:83333 20181128 GO_Central 23651 GO_AR:0000008 Warning Do not annotate to: GO:0005215 'transporter activity' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate EcoGene EG13665 ybhI GO:0005215 PMID:21873635 IBA EcoGene:EG13538|PANTHER:PTN000032104 F Inner membrane protein YbhI UniProtKB:P75763|PTN000032133 protein taxon:83333 20170421 GO_Central 23700 GO_AR:0000008 Warning Do not annotate to: GO:0005215 'transporter activity' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate EcoGene EG11658 uidB GO:0005215 PMID:21873635 IBA EcoGene:EG10578|EcoGene:EG11658|EcoGene:EG11841|MGI:MGI:1923824|MGI:MGI:3583946|PANTHER:PTN000140373|UniProtKB:A6NFX1|UniProtKB:Q8NA29 F Glucuronide carrier protein homolog UniProtKB:P0CE44|PTN000140527 protein taxon:83333 20181024 GO_Central 23776 GO_AR:0000008 Warning Do not annotate to: GO:0005215 'transporter activity' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate EcoGene EG12129 uraA GO:0005215 PMID:21873635 IBA EcoGene:EG12129|EcoGene:EG13853|MGI:MGI:1341903|MGI:MGI:1859682|PANTHER:PTN000122237|RGD:619875|RGD:619876|UniProtKB:B9VMA9|UniProtKB:Q3E7D0|UniProtKB:Q8GZD4|UniProtKB:Q9UGH3|UniProtKB:Q9UHI7 F Uracil permease UniProtKB:P0AGM7|PTN000122477 protein taxon:83333 20181128 GO_Central 23855 GO_AR:0000008 Warning Do not annotate to: GO:0005215 'transporter activity' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate EcoGene EG10578 melB GO:0005215 PMID:21873635 IBA EcoGene:EG10578|EcoGene:EG11658|EcoGene:EG11841|MGI:MGI:1923824|MGI:MGI:3583946|PANTHER:PTN000140373|UniProtKB:A6NFX1|UniProtKB:Q8NA29 F Melibiose carrier protein UniProtKB:P02921|PTN000792847 protein taxon:83333 20181024 GO_Central 24251 GO_AR:0000008 Warning Do not annotate to: GO:0005215 'transporter activity' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate EcoGene EG13538 citT GO:0005215 PMID:21873635 IBA EcoGene:EG13538|PANTHER:PTN000032104 F Citrate/succinate antiporter UniProtKB:P0AE74|PTN000032132 protein taxon:83333 20170421 GO_Central 24378 GO_AR:0000008 Warning Do not annotate to: GO:0005215 'transporter activity' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate EcoGene EG13346 yagG GO:0005215 PMID:21873635 IBA EcoGene:EG10578|EcoGene:EG11658|EcoGene:EG11841|MGI:MGI:1923824|MGI:MGI:3583946|PANTHER:PTN000140373|UniProtKB:A6NFX1|UniProtKB:Q8NA29 F Uncharacterized symporter YagG UniProtKB:P75683|PTN000792848 protein taxon:83333 20181024 GO_Central 25657 GO_AR:0000008 Warning Do not annotate to: GO:0005215 'transporter activity' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate EcoGene EG11686 yicJ GO:0005215 PMID:21873635 IBA EcoGene:EG10578|EcoGene:EG11658|EcoGene:EG11841|MGI:MGI:1923824|MGI:MGI:3583946|PANTHER:PTN000140373|UniProtKB:A6NFX1|UniProtKB:Q8NA29 F Inner membrane symporter YicJ UniProtKB:P31435|PTN000792845 protein taxon:83333 20181024 GO_Central 25867 GO_AR:0000008 Warning Do not annotate to: GO:0005215 'transporter activity' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate EcoGene EG11842 yihP GO:0005215 PMID:21873635 IBA EcoGene:EG10578|EcoGene:EG11658|EcoGene:EG11841|MGI:MGI:1923824|MGI:MGI:3583946|PANTHER:PTN000140373|UniProtKB:A6NFX1|UniProtKB:Q8NA29 F Putative 2,3-dihydroxypropane-1-sulfonate exporter UniProtKB:P32137|PTN000792846 protein taxon:83333 20181024 GO_Central #------------