GAF summary
Found 115732 annotations in 115751 lines.
GAF Validation Summary
Errors are reported first.
For rule GO_AR:0000005 (http://www.geneontology.org/GO.annotation_qc.shtml#GO_AR:0000005)
No ISS or ISS-related annotations to 'protein binding ; GO:0005515', there are 3 violations with type Error.
For rule GO_AR:0000014 (http://www.geneontology.org/GO.annotation_qc.shtml#GO_AR:0000014)
Valid GO term ID, there is one violation with type Error.
For rule GO_AR:0000003 (http://www.geneontology.org/GO.annotation_qc.shtml#GO_AR:0000003)
Annotations to 'binding ; GO:0005488' and 'protein binding ; GO:0005515' should be made with IPI and an interactor in the 'with' field, there are 3 violations with type Warning.
GAF Prediction Summary
Found 25 predictions, see prediction file for details.
Used Ontology Summary
go/extensions/go-gaf go/releases/2019-05-09/extensions/go-gaf.owl
Group: goa - Dataset: goa_dog
SUMMARY
This report generated on 2019-05-09
- Associations: 115732
- Lines in file (incl headers): 169618
- Lines skipped: 53874
!gaf-version: 2.1
!
!The set of protein accessions included in this file is based on UniProt reference proteomes, which provide one protein per gene.
!They include the protein sequences annotated in Swiss-Prot or the longest TrEMBL transcript if there is no Swiss-Prot record.
!If a particular protein accession is not annotated with GO, then it will not appear in this file.
!
!Note that the annotation set in this file is filtered in order to reduce redundancy; the full, unfiltered set can be found in
!ftp://ftp.ebi.ac.uk/pub/databases/GO/goa/UNIPROT/goa_uniprot_all.gz
!
!Generated: 2019-05-07 11:13
!GO-version: http://purl.obolibrary.org/obo/go/releases/2019-05-04/extensions/go-plus.owl
!
Contents
other
MESSAGES
other
GO:0005623 cell AnnotationPropagation C GO:0042147 retrograde transport, endosome to Golgi ISS
GO:0005829 cytosol AnnotationPropagation C GO:0042147 retrograde transport, endosome to Golgi ISS
GO:0005623 cell AnnotationPropagation C GO:0035356 cellular triglyceride homeostasis ISS
GO:0005623 cell AnnotationPropagation C GO:0051209 release of sequestered calcium ion into cytosol ISS
GO:0005623 cell AnnotationPropagation C GO:0047496 vesicle transport along microtubule ISS
GO:0005623 cell AnnotationPropagation C GO:0031204 posttranslational protein targeting to membrane, translocation ISS
GO:0005623 cell AnnotationPropagation C GO:0051482 positive regulation of cytosolic calcium ion concentration involved in phospholipase C-activating G protein-coupled signaling pathway ISS
GO:0070588 calcium ion transmembrane transport AnnotationPropagation P GO:1905060 calcium:cation antiporter activity involved in regulation of postsynaptic cytosolic calcium ion concentration EXP
GO:0099566 regulation of postsynaptic cytosolic calcium ion concentration AnnotationPropagation P GO:1905060 calcium:cation antiporter activity involved in regulation of postsynaptic cytosolic calcium ion concentration EXP
GO:0036065 fucosylation AnnotationPropagation P GO:0046920 alpha-(1->3)-fucosyltransferase activity ISS
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0101021 estrogen 2-hydroxylase activity ISS
GO:0005623 cell AnnotationPropagation C GO:0061502 early endosome to recycling endosome transport IDA
GO:0005829 cytosol AnnotationPropagation C GO:0061502 early endosome to recycling endosome transport IDA
GO:0005623 cell AnnotationPropagation C GO:0030644 cellular chloride ion homeostasis ISS
GO:0010452 histone H3-K36 methylation AnnotationPropagation P GO:0046975 histone methyltransferase activity (H3-K36 specific) ISS
GO:0005623 cell AnnotationPropagation C GO:0097277 cellular urea homeostasis ISS
GO:0005623 cell AnnotationPropagation C GO:0097553 calcium ion transmembrane import into cytosol ISS
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0070330 aromatase activity ISS
GO:0005623 cell AnnotationPropagation C GO:0051480 regulation of cytosolic calcium ion concentration IDA
GO:0005623 cell AnnotationPropagation C GO:0031204 posttranslational protein targeting to membrane, translocation ISS
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0101021 estrogen 2-hydroxylase activity ISS
GO:0005623 cell AnnotationPropagation C GO:0045047 protein targeting to ER IDA
GO:0005789 endoplasmic reticulum membrane FoldBasedPredictor GO:1990381 ubiquitin-specific protease binding occurs_in GO:0005789 endoplasmic reticulum membrane IPI
GO:0005789 endoplasmic reticulum membrane FoldBasedPredictor GO:0051117 ATPase binding occurs_in GO:0005789 endoplasmic reticulum membrane IPI
GO:0097458 neuron part FoldBasedPredictor GO:0015630 microtubule cytoskeleton part_of CL:0000540 neuron ISS