• Summary (original)
• Report (original)
• OWLTools check (original)
• Predictions (original)
• Predictions (experimental) (original)

GAF summary

Found 25 annotations in 40 lines.

GAF Validation Summary

No errors, warnings, recommendations, inferences, or predictions to report.

Used Ontology Summary

go/extensions/go-gaf

Group: goa - Dataset: goa_chicken_complex

SUMMARY

This report generated on 2018-10-01

• Associations: 25
• Lines in file (incl headers): 45
• Lines skipped: 20

Contents

gorule-0000001

other

MESSAGES

gorule-0000001

GAF lines are parsed according to GAF 2.1 specifications

• total: 12

Messages

• ERROR - Unknown evidence class: Expecting a known ECO GAF code, e.g ISS (NO_MAPPING) -- ComplexPortal CPX-173 2xchrna4-3xchrnb2_chick GO:0022848 PMID:10908297 NO_MAPPING F Neuronal nicotinic acetylcholine receptor complex, 2xalpha4-3xbeta2 ionotropic acetylcholine receptor complex|neuronal acetylcholine receptor; alpha4-beta2|2xCHRNA4:3xCHRNB2|neuronal nicotinic acetylcholine-gated ion channel complex|neuronal nicotinic cholinergic receptor complex, alpha4-beta2|neuronal nicotinic acetylcholine-gated receptor-channel complex|neuronal nicotinic acetylcholine-gated cation channel complex|neuronal nicotinic acetylcholine-gated receptor complex protein_complex taxon:9031 20150825 ComplexPortal
• ERROR - Unknown evidence class: Expecting a known ECO GAF code, e.g ISS (NO_MAPPING) -- ComplexPortal CPX-254 chrna1-chrng_chick GO:0022848 PMID:21480901 NO_MAPPING F Muscle-type nicotinic acetylcholine receptor complex, alpha1-beta1-delta-gamma muscle-type nicotinic acetylcholine receptor; alpha1-beta1-delta-gamma|muscle-type nicotinic cholinergic receptor complex (foetal extrajunctional)|muscle-type nicotinic acetylcholine-gated receptor complex (foetal extrajunctional)|muscle-type nicotinic acetylcholine-gated receptor-channel complex (foetal extrajunctional)|muscle-type nicotinic acetylcholine-gated cation channel complex (foetal extrajunctional)|ionotropic acetylcholine receptor complex (foetal extrajunctional)|2xCHRNA1:CHRNB1:CHRND:CHRNG|muscle-type nicotinic cholinergic receptor complex, alpha1-beta1-delta-gamma|muscle-type nicotinic acetylcholine-gated ion channel complex (foetal extrajunctional)|muscle-type nicotinic acetylcholine receptor complex (foetal extrajunctional) protein_complex taxon:9031 20151021 ComplexPortal
• ERROR - Unknown evidence class: Expecting a known ECO GAF code, e.g ISS (NO_MAPPING) -- ComplexPortal CPX-254 chrna1-chrng_chick GO:0042166 PMID:22841691 NO_MAPPING F Muscle-type nicotinic acetylcholine receptor complex, alpha1-beta1-delta-gamma muscle-type nicotinic acetylcholine receptor; alpha1-beta1-delta-gamma|muscle-type nicotinic cholinergic receptor complex (foetal extrajunctional)|muscle-type nicotinic acetylcholine-gated receptor complex (foetal extrajunctional)|muscle-type nicotinic acetylcholine-gated receptor-channel complex (foetal extrajunctional)|muscle-type nicotinic acetylcholine-gated cation channel complex (foetal extrajunctional)|ionotropic acetylcholine receptor complex (foetal extrajunctional)|2xCHRNA1:CHRNB1:CHRND:CHRNG|muscle-type nicotinic cholinergic receptor complex, alpha1-beta1-delta-gamma|muscle-type nicotinic acetylcholine-gated ion channel complex (foetal extrajunctional)|muscle-type nicotinic acetylcholine receptor complex (foetal extrajunctional) protein_complex taxon:9031 20151021 ComplexPortal
• ERROR - Unknown evidence class: Expecting a known ECO GAF code, e.g ISS (NO_MAPPING) -- ComplexPortal CPX-254 chrna1-chrng_chick GO:0095500 PMID:21480901 NO_MAPPING P Muscle-type nicotinic acetylcholine receptor complex, alpha1-beta1-delta-gamma muscle-type nicotinic acetylcholine receptor; alpha1-beta1-delta-gamma|muscle-type nicotinic cholinergic receptor complex (foetal extrajunctional)|muscle-type nicotinic acetylcholine-gated receptor complex (foetal extrajunctional)|muscle-type nicotinic acetylcholine-gated receptor-channel complex (foetal extrajunctional)|muscle-type nicotinic acetylcholine-gated cation channel complex (foetal extrajunctional)|ionotropic acetylcholine receptor complex (foetal extrajunctional)|2xCHRNA1:CHRNB1:CHRND:CHRNG|muscle-type nicotinic cholinergic receptor complex, alpha1-beta1-delta-gamma|muscle-type nicotinic acetylcholine-gated ion channel complex (foetal extrajunctional)|muscle-type nicotinic acetylcholine receptor complex (foetal extrajunctional) protein_complex taxon:9031 20151021 ComplexPortal
• ERROR - Unknown evidence class: Expecting a known ECO GAF code, e.g ISS (NO_MAPPING) -- ComplexPortal CPX-704 rxra-thra_chick GO:0002157 PMID:1310350 NO_MAPPING P RXRalpha-TRalpha nuclear hormone receptor complex NR2B1-NR1A1 complex|RXRA:THRA|Thyroid hormone receptor complex protein_complex taxon:9031 20161219 ComplexPortal
• ERROR - Unknown evidence class: Expecting a known ECO GAF code, e.g ISS (NO_MAPPING) -- ComplexPortal CPX-704 rxra-thra_chick GO:0004887 PMID:1310350 NO_MAPPING F RXRalpha-TRalpha nuclear hormone receptor complex NR2B1-NR1A1 complex|RXRA:THRA|Thyroid hormone receptor complex protein_complex taxon:9031 20161219 ComplexPortal
• ERROR - Unknown evidence class: Expecting a known ECO GAF code, e.g ISS (NO_MAPPING) -- ComplexPortal CPX-704 rxra-thra_chick GO:0042789 PMID:1310350 NO_MAPPING P RXRalpha-TRalpha nuclear hormone receptor complex NR2B1-NR1A1 complex|RXRA:THRA|Thyroid hormone receptor complex protein_complex taxon:9031 20161219 ComplexPortal
• ERROR - Unknown evidence class: Expecting a known ECO GAF code, e.g ISS (NO_MAPPING) -- ComplexPortal CPX-704 rxra-thra_chick GO:0043565 PMID:1310350 NO_MAPPING F RXRalpha-TRalpha nuclear hormone receptor complex NR2B1-NR1A1 complex|RXRA:THRA|Thyroid hormone receptor complex protein_complex taxon:9031 20161219 ComplexPortal
• ERROR - Unknown evidence class: Expecting a known ECO GAF code, e.g ISS (NO_MAPPING) -- ComplexPortal CPX-704 rxra-thra_chick GO:0044323 PMID:1310350 NO_MAPPING F RXRalpha-TRalpha nuclear hormone receptor complex NR2B1-NR1A1 complex|RXRA:THRA|Thyroid hormone receptor complex protein_complex taxon:9031 20161219 ComplexPortal
• ERROR - Unknown evidence class: Expecting a known ECO GAF code, e.g ISS (NO_MAPPING) -- ComplexPortal CPX-704 rxra-thra_chick GO:0045944 PMID:1310350 NO_MAPPING P RXRalpha-TRalpha nuclear hormone receptor complex NR2B1-NR1A1 complex|RXRA:THRA|Thyroid hormone receptor complex protein_complex taxon:9031 20161219 ComplexPortal
• ERROR - Unknown evidence class: Expecting a known ECO GAF code, e.g ISS (NO_MAPPING) -- ComplexPortal CPX-704 rxra-thra_chick GO:0070324 PMID:22474364 NO_MAPPING F RXRalpha-TRalpha nuclear hormone receptor complex NR2B1-NR1A1 complex|RXRA:THRA|Thyroid hormone receptor complex protein_complex taxon:9031 20161219 ComplexPortal
• ERROR - Unknown evidence class: Expecting a known ECO GAF code, e.g ISS (NO_MAPPING) -- ComplexPortal CPX-960 collagen_ii_chick GO:0030020 PMID:26059120 NO_MAPPING F Collagen type II trimer Type II collagen|COL1A2 trimer protein_complex taxon:9031 20170526 ComplexPortal

other

• total: 0

#Line number RuleID ViolationType Message Line
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# Validation for #25 annotations in 40 lines
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# No errors, warnings, or recommendations to report.