#Line number RuleID ViolationType Message Line #------------ #------------ # Validation for #119749 annotations in 119767 lines #------------ #Line number RuleID ViolationType Message Line #------------ # GO_AR:0000003 Annotations to 'binding ; GO:0005488' and 'protein binding ; GO:0005515' should be made with IPI and an interactor in the 'with' field Warning count: 16 106654 GO_AR:0000003 Warning Annotations to 'binding' (GO:0005488) and 'protein binding' (GO:0005515) should be made with an IPI evidence code and the interactor in the 'with' field SGD S000000777 VMA8 GO:0005515 PMID:21873635 IBA PANTHER:PTN002268884|UniProtKB:Q9Y5K8 F Subunit D of the V1 peripheral membrane domain of V-ATPase YEL051W|H(+)-transporting V1 sector ATPase subunit D gene taxon:559292 20180504 GO_Central 107559 GO_AR:0000003 Warning Annotations to 'binding' (GO:0005488) and 'protein binding' (GO:0005515) should be made with an IPI evidence code and the interactor in the 'with' field SGD S000002660 BTT1 GO:0005515 PMID:21873635 IBA FB:FBgn0000181|PANTHER:PTN000039173|UniProtKB:P20290|UniProtKB:Q96K17|WB:WBGene00002045 F Heterotrimeric nascent polypeptide-associated complex beta3 subunit YDR252W|CCR4-NOT core subunit BTT1 gene taxon:559292 20180521 GO_Central 108221 GO_AR:0000003 Warning Annotations to 'binding' (GO:0005488) and 'protein binding' (GO:0005515) should be made with an IPI evidence code and the interactor in the 'with' field SGD S000005256 RFA2 GO:0005515 PMID:21873635 IBA MGI:MGI:1339939|PANTHER:PTN000360435|TAIR:locus:2061072|UniProtKB:P15927|UniProtKB:Q5Z8L1|UniProtKB:Q6H7J5|UniProtKB:Q6K9U2|UniProtKB:Q8LFJ8|WB:WBGene00019767 F Subunit of heterotrimeric Replication Protein A (RPA) YNL312W|BUF1|RPA2|RPA32 gene taxon:559292 20180425 GO_Central 108596 GO_AR:0000003 Warning Annotations to 'binding' (GO:0005488) and 'protein binding' (GO:0005515) should be made with an IPI evidence code and the interactor in the 'with' field SGD S000000494 BSD2 GO:0005515 PMID:21873635 IBA PANTHER:PTN001002076|SGD:S000000494 F Heavy metal ion homeostasis protein YBR290W gene taxon:559292 20180514 GO_Central 109272 GO_AR:0000003 Warning Annotations to 'binding' (GO:0005488) and 'protein binding' (GO:0005515) should be made with an IPI evidence code and the interactor in the 'with' field SGD S000000493 SNF5 GO:0005515 PMID:21873635 IBA FB:FBgn0011715|MGI:MGI:1328366|PANTHER:PTN000001217|PomBase:SPCC16A11.14|RGD:1308761|UniProtKB:P93045|UniProtKB:Q12824|WB:WBGene00011111 F Subunit of the SWI/SNF chromatin remodeling complex YBR289W|HAF4|SWI10|TYE4 gene taxon:559292 20180228 GO_Central 109604 GO_AR:0000003 Warning Annotations to 'binding' (GO:0005488) and 'protein binding' (GO:0005515) should be made with an IPI evidence code and the interactor in the 'with' field SGD S000004313 SFH1 GO:0005515 PMID:21873635 IBA FB:FBgn0011715|MGI:MGI:1328366|PANTHER:PTN000001217|PomBase:SPCC16A11.14|RGD:1308761|UniProtKB:P93045|UniProtKB:Q12824|WB:WBGene00011111 F Component of the RSC chromatin remodeling complex YLR321C gene taxon:559292 20180228 GO_Central 110791 GO_AR:0000003 Warning Annotations to 'binding' (GO:0005488) and 'protein binding' (GO:0005515) should be made with an IPI evidence code and the interactor in the 'with' field SGD S000003113 TIP20 GO:0005515 PMID:21873635 IBA PANTHER:PTN000338119|UniProtKB:Q6NUQ1 F Peripheral membrane protein required for COPI vesicle fusion to the ER YGL145W|TIP1 gene taxon:559292 20180425 GO_Central 111259 GO_AR:0000003 Warning Annotations to 'binding' (GO:0005488) and 'protein binding' (GO:0005515) should be made with an IPI evidence code and the interactor in the 'with' field SGD S000006048 HHO1 GO:0005515 PMID:21873635 IBA MGI:MGI:107502|MGI:MGI:1861461|MGI:MGI:1931523|MGI:MGI:1931526|MGI:MGI:1931527|MGI:MGI:2685307|PANTHER:PTN000157378|UniProtKB:P02253|UniProtKB:P07305|UniProtKB:P10412|UniProtKB:P16403|UniProtKB:Q02539 F Histone H1, linker histone with roles in meiosis and sporulation YPL127C|histone H1 gene taxon:559292 20180503 GO_Central 111844 GO_AR:0000003 Warning Annotations to 'binding' (GO:0005488) and 'protein binding' (GO:0005515) should be made with an IPI evidence code and the interactor in the 'with' field SGD S000000976 GRX4 GO:0005515 PMID:21873635 IBA EcoGene:EG12181|MGI:MGI:1353653|PANTHER:PTN000033618|PomBase:SPAPB2B4.02|PomBase:SPBC26H8.06|TAIR:locus:2093297|TAIR:locus:2135363|UniProtKB:O76003|UniProtKB:Q86SX6 F Glutathione-dependent oxidoreductase YER174C|monothiol glutaredoxin GRX4 gene taxon:559292 20180514 GO_Central 112958 GO_AR:0000003 Warning Annotations to 'binding' (GO:0005488) and 'protein binding' (GO:0005515) should be made with an IPI evidence code and the interactor in the 'with' field SGD S000005958 EGD1 GO:0005515 PMID:21873635 IBA FB:FBgn0000181|PANTHER:PTN000039173|UniProtKB:P20290|UniProtKB:Q96K17|WB:WBGene00002045 F Subunit beta1 of the nascent polypeptide-associated complex (NAC) YPL037C gene taxon:559292 20180521 GO_Central 113879 GO_AR:0000003 Warning Annotations to 'binding' (GO:0005488) and 'protein binding' (GO:0005515) should be made with an IPI evidence code and the interactor in the 'with' field SGD S000005980 GRX5 GO:0005515 PMID:21873635 IBA EcoGene:EG12181|MGI:MGI:1353653|PANTHER:PTN000033618|PomBase:SPAPB2B4.02|PomBase:SPBC26H8.06|TAIR:locus:2093297|TAIR:locus:2135363|UniProtKB:O76003|UniProtKB:Q86SX6 F Glutathione-dependent oxidoreductase YPL059W|monothiol glutaredoxin GRX5 gene taxon:559292 20180514 GO_Central 114283 GO_AR:0000003 Warning Annotations to 'binding' (GO:0005488) and 'protein binding' (GO:0005515) should be made with an IPI evidence code and the interactor in the 'with' field SGD S000004802 SGS1 GO:0005515 PMID:21873635 IBA PANTHER:PTN001009292|PomBase:SPAC2G11.12 F RecQ family nucleolar DNA helicase YMR190C|ATP-dependent DNA helicase SGS1 gene taxon:559292 20180411 GO_Central 115514 GO_AR:0000003 Warning Annotations to 'binding' (GO:0005488) and 'protein binding' (GO:0005515) should be made with an IPI evidence code and the interactor in the 'with' field SGD S000001077 NEL1 GO:0005515 PMID:21873635 IBA MGI:MGI:1349635|MGI:MGI:1350925|PANTHER:PTN000124617|UniProtKB:Q15436|UniProtKB:Q15437 F Activator of Sar1p GTPase activity YHR035W gene taxon:559292 20180425 GO_Central 117464 GO_AR:0000003 Warning Annotations to 'binding' (GO:0005488) and 'protein binding' (GO:0005515) should be made with an IPI evidence code and the interactor in the 'with' field SGD S000006385 SEC23 GO:0005515 PMID:21873635 IBA MGI:MGI:1349635|MGI:MGI:1350925|PANTHER:PTN000124617|UniProtKB:Q15436|UniProtKB:Q15437 F GTPase-activating protein, stimulates the GTPase activity of Sar1p YPR181C|GTPase-activating protein SEC23 gene taxon:559292 20180425 GO_Central 118743 GO_AR:0000003 Warning Annotations to 'binding' (GO:0005488) and 'protein binding' (GO:0005515) should be made with an IPI evidence code and the interactor in the 'with' field SGD S000002820 RRP17 GO:0005515 PMID:21873635 IBA PANTHER:PTN000377916|UniProtKB:Q9UGY1 F Component of the pre-60S pre-ribosomal particle YDR412W gene taxon:559292 20180510 GO_Central 119024 GO_AR:0000003 Warning Annotations to 'binding' (GO:0005488) and 'protein binding' (GO:0005515) should be made with an IPI evidence code and the interactor in the 'with' field SGD S000002505 GRX3 GO:0005515 PMID:21873635 IBA EcoGene:EG12181|MGI:MGI:1353653|PANTHER:PTN000033618|PomBase:SPAPB2B4.02|PomBase:SPBC26H8.06|TAIR:locus:2093297|TAIR:locus:2135363|UniProtKB:O76003|UniProtKB:Q86SX6 F Glutathione-dependent oxidoreductase YDR098C|monothiol glutaredoxin GRX3 gene taxon:559292 20180514 GO_Central #------------ # GO_AR:0000008 No annotations should be made to uninformative high level terms Warning count: 10 6195 GO_AR:0000008 Warning Do not annotate to: GO:0006810 'transport' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate SGD S000001812 YKR104W GO:0006810 PMID:9020838|SGD_REF:S000058031 ISS P Putative transporter of the MRP subfamily YKR104W|NFT1 gene taxon:559292 20040617 SGD 23850 GO_AR:0000008 Warning Do not annotate to: GO:0006810 'transport' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate SGD S000001704 MCH2 GO:0006810 PMID:11536335|SGD_REF:S000065864 ISS P Protein with similarity to mammalian monocarboxylate permeases YKL221W gene taxon:559292 20020918 SGD 26264 GO_AR:0000008 Warning Do not annotate to: GO:0006810 'transport' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate SGD S000000185 AVT5 GO:0006810 PMID:11274162|SGD_REF:S000072326 ISS UniProtKB:P40074 P Putative transporter YBL089W|amino acid transporter gene taxon:559292 20141111 SGD 31035 GO_AR:0000008 Warning Do not annotate to: GO:0006810 'transport' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate SGD S000000062 SEO1 GO:0006810 PMID:9348664|SGD_REF:S000058231 ISS P Putative permease YAL067C|putative permease SEO1 gene taxon:559292 20020614 SGD 36660 GO_AR:0000008 Warning Do not annotate to: GO:0006810 'transport' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate SGD S000001941 YFR045W GO:0006810 PMID:10930523|SGD_REF:S000049213 ISS P Putative mitochondrial transport protein YFR045W gene taxon:559292 20021017 SGD 44515 GO_AR:0000008 Warning Do not annotate to: GO:0006810 'transport' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate SGD S000005069 ESBP6 GO:0006810 PMID:11536335|SGD_REF:S000065864 ISS P Protein with similarity to monocarboxylate permeases YNL125C|MCH3 gene taxon:559292 20020918 SGD 53717 GO_AR:0000008 Warning Do not annotate to: GO:0006810 'transport' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate SGD S000002212 MCH1 GO:0006810 PMID:11536335|SGD_REF:S000065864 ISS P Protein with similarity to mammalian monocarboxylate permeases YDL054C gene taxon:559292 20020918 SGD 54213 GO_AR:0000008 Warning Do not annotate to: GO:0006810 'transport' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate SGD S000003994 THI73 GO:0006810 PMID:10869563|SGD_REF:S000051510 ISS UniProtKB:P15365 P Putative plasma membrane permease YLR004C gene taxon:559292 20030421 SGD 54638 GO_AR:0000008 Warning Do not annotate to: GO:0006810 'transport' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate SGD S000005435 YOL075C GO:0006810 PMID:9020838|SGD_REF:S000058031 ISS P Putative ABC transporter YOL075C gene taxon:559292 20021120 SGD 54668 GO_AR:0000008 Warning Do not annotate to: GO:0006810 'transport' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate SGD S000005479 MCH4 GO:0006810 PMID:11536335|SGD_REF:S000065864 ISS P Protein with similarity to mammalian monocarboxylate permeases YOL119C gene taxon:559292 20020918 SGD #------------