• Summary (original)
• Report (original)
• OWLTools check (original)
• Predictions (original)
• Predictions (experimental) (original)

GAF summary

Found 6270 annotations in 6275 lines.

GAF Validation Summary Errors are reported first.

For rule GO_AR:0000008 (http://www.geneontology.org/GO.annotation_qc.shtml#GO_AR:0000008) No annotations should be made to uninformative high level terms, there are 24 violations with type Warning.

GAF Prediction Summary

Found 155 predictions, see prediction file for details.

Used Ontology Summary

go/extensions/go-gaf

SUMMARY

• Associations: 6270
• Lines in file (incl headers): 6275
• Lines skipped: 5

STATISTICS

• taxon_sample: []
• taxon_count: 0
• reference_count: 0
• subject_count: 0
• object_sample: []
• subject_sample: []
• object_count: 0

MESSAGES

• FATAL: 0
• ERROR: 3
• WARNING: 23

ERROR

• Unknown evidence class: obj:'NR' "GORULE:0000027: Expecting a known ECO GAF code, e.g ISS" GeneDB LmjF.20.0560:mRNA LmjF.20.0560 GO:0005829 GO_REF:0000002 NR C cytidine triphosphate synthase, putative LmjF20.0560 transcript taxon:347515 20100816 GeneDB
• Unknown evidence class: obj:'NR' "GORULE:0000027: Expecting a known ECO GAF code, e.g ISS" GeneDB LmjF.03.0080:mRNA GAT GO:0005829 GO_REF:0000002 NR C glycerol-3-phosphate acyl transferase LmjF03.0080 transcript taxon:347515 20100803 GeneDB
• Unknown evidence class: obj:'NR' "GORULE:0000027: Expecting a known ECO GAF code, e.g ISS" GeneDB LmjF.20.1120:mRNA TOR4 GO:0005829 GO_REF:0000002 NR C phosphatidylinositol 3-kinase, putative LmjF20.1120 transcript taxon:347515 20100817 GeneDB

WARNING

• Obsolete class: obj:'GO:1902361' "Violates GORULE:0000020, but was repaired" GeneDB LmjF.01.0335:mRNA MPC1 GO:1902361 GO_REF:0000024 ISO GeneDB:Tb927.9.3780 P Mitochondrial pyruvate carrier 1 LmjF01.0335 transcript taxon:347515 20160725 GeneDB
• Obsolete class: obj:'GO:0043623' "Violates GORULE:0000020, but was repaired" GeneDB LmjF.29.1820:mRNA LmjF.29.1820 GO:0043623 GO_REF:0000002 ISO GeneDB:Tb927.3.4380 P Tob55, putative LmjF29.1820 transcript taxon:347515 20090617 GeneDB
• Obsolete class: obj:'GO:0015758' "Violates GORULE:0000020, but was repaired" GeneDB LmjF.36.6280:mRNA GT3 GO:0015758 GO_REF:0000002 ISO GeneDB:LmxM.36.6280 P glucose transporter 3 LmjF36.6280 transcript taxon:347515 20131112 GeneDB
• Obsolete class: obj:'GO:0032054' "Violates GORULE:0000020, but was repaired" GeneDB LmjF.29.0510:mRNA LmjF.29.0510 GO:0032054 PMID:20460437 ISO GeneDB:LinJ.29.0520 P ADF/Cofilin LmjF29.0510 transcript taxon:347515 20100720 GeneDB
• Obsolete class: obj:'GO:0030529' "Violates GORULE:0000020, but was repaired" GeneDB LmjF.32.0020:mRNA LmjF.32.0020 GO:0030529 GO_REF:0000002 ISA UniProtKB:BFR1_YEAST C nuclear segregation protein, putative LmjF32.0020 transcript taxon:347515 20130911 GeneDB
• Obsolete class: obj:'GO:0015784' "Violates GORULE:0000020, but was repaired" GeneDB LmjF.34.3120:mRNA LPG2 GO:0015784 PMID:9013638 IMP P lipophosphoglycan biosynthetic protein (lpg2) LmjF34.3120 transcript taxon:347515 20100616 GeneDB
• Obsolete class: obj:'GO:0007067' "Violates GORULE:0000020, but was repaired" GeneDB LmjF.26.0200:mRNA LmjF.26.0200 GO:0007067 GO_REF:0000002 ISO GeneDB:Tb927.7.1710 P eukaryotic peptide chain release factor subunit 1, putative LmjF26.0200 transcript taxon:347515 20120725 GeneDB
• Obsolete class: obj:'GO:0030529' "Violates GORULE:0000020, but was repaired" GeneDB LmjF.04.1170:mRNA DRBD3 GO:0030529 GO_REF:0000024 ISO GeneDB:Tb927.9.8740 C Double RNA binding domain protein 3 PTB1|LmjF04.1170 transcript taxon:347515 20130822 GeneDB
• Obsolete class: obj:'GO:0015758' "Violates GORULE:0000020, but was repaired" GeneDB LmjF.36.6300:mRNA GT1 GO:0015758 GO_REF:0000002 ISO GeneDB:LmxM.36.6300 P glucose transporter 1 LmjF36.6300 transcript taxon:347515 20131112 GeneDB
• Obsolete class: obj:'GO:0043566' "Violates GORULE:0000020, but was repaired" GeneDB LmjF.09.1480:mRNA JBP1 GO:0043566 GO_REF:0000024 ISO GeneDB:Tb927.11.13640 F Thymine dioxygenase JBP1 LmjF09.1480 transcript taxon:347515 20160126 GeneDB
• Obsolete class: obj:'GO:1902361' "Violates GORULE:0000020, but was repaired" GeneDB LmjF.14.1460:mRNA MPC2 GO:1902361 GO_REF:0000024 ISO GeneDB:Tb927.7.3520 P Mitochondrial pyruvate carrier 2 LmjF14.1460 transcript taxon:347515 20160725 GeneDB
• Obsolete class: obj:'GO:0044822' "Violates GORULE:0000020, but was repaired" GeneDB LmjF.35.3540:mRNA PNO1 GO:0044822 GO_REF:0000012 ISA UniProtKB:PNO1_HUMAN F pre-rRNA-processing protein PNO1, putative LmjF35.3540 transcript taxon:347515 20140731 GeneDB
• Obsolete class: obj:'GO:0032054' "Violates GORULE:0000020, but was repaired" GeneDB LmjF.35.4280:mRNA SAS6 GO:0032054 GO_REF:0000024 ISO GeneDB:Tb927.9.10550 P Spindle assembly abnormal protein 6 homolog LmjF35.4280|SASS6 transcript taxon:347515 20160726 GeneDB
• Obsolete class: obj:'GO:0040023' "Violates GORULE:0000020, but was repaired" GeneDB LmjF.27.1760:mRNA tbccd1 GO:0040023 GO_REF:0000002 ISO GeneDB:Tb927.11.2440 P Tubulin cofactor C domain-containing protein 1, putative LmjF27.1760 transcript taxon:347515 20140414 GeneDB
• Obsolete class: obj:'GO:0030529' "Violates GORULE:0000020, but was repaired" GeneDB LmjF.27.0130:mRNA LmjF.27.0130 GO:0030529 PMID:19247446 ISO GeneDB:Tb927.3.720 C WW domain/Zinc finger C-x8-C-x5-C-x3-H type (and similar), putative LmjF27.0130 transcript taxon:347515 20090715 GeneDB
• Obsolete class: obj:'GO:0032054' "Violates GORULE:0000020, but was repaired" GeneDB LmjF.29.2210:mRNA LRTP GO:0032054 GO_REF:0000024 ISO GeneDB:Tb927.3.4770 P leucine-rich repeat-containing protein LmjF29.2210 transcript taxon:347515 20141209 GeneDB
• Obsolete class: obj:'GO:0015758' "Violates GORULE:0000020, but was repaired" GeneDB LmjF.36.6290:mRNA GT2 GO:0015758 GO_REF:0000002 ISO GeneDB:LmxM.36.6290 P glucose transporter 2 LmjF36.6290 transcript taxon:347515 20131112 GeneDB
• Obsolete class: obj:'GO:0001104' "Violates GORULE:0000020, but was repaired" GeneDB LmjF.12.0350:mRNA LmjF.12.0350 GO:0001104 GO_REF:0000002 ISO GeneDB:Tb927.6.850 F CCR4-NOT transcription complex subunit 2, putative LmjF12.0350 transcript taxon:347515 20120319 GeneDB
• Obsolete class: obj:'GO:0007067' "Violates GORULE:0000020, but was repaired" GeneDB LmjF.36.1640:mRNA UMSBP GO:0007067 GO_REF:0000024 ISO GeneDB:Tb927.10.6060 P universal minicircle sequence binding protein, putative LmjF36.1640 transcript taxon:347515 20141124 GeneDB
• Obsolete class: obj:'GO:0043234' "Violates GORULE:0000020, but was repaired" GeneDB LmjF.08.1170:mRNA MRB3010 GO:0043234 GO_REF:0000024 ISO GeneDB:Tb927.5.3010 C MRB1 complex subunit MRB3010 LmjF08.1170 transcript taxon:347515 20150105 GeneDB
• Obsolete class with no replacement: obj:'GO:0050983' "Violates GORULE:0000020" GeneDB LmjF.34.0330:mRNA DHS34 GO:0050983 PMID:19880510 IDA P deoxyhypusine synthase LmjF34.0330 transcript taxon:347515 20101116 GeneDB
• Obsolete class: obj:'GO:0006461' "Violates GORULE:0000020, but was repaired" GeneDB LmjF.29.1820:mRNA LmjF.29.1820 GO:0006461 PMID:20659504 ISO GeneDB:Tb927.3.4380 P Tob55, putative LmjF29.1820 transcript taxon:347515 20100805 GeneDB
• Obsolete class: obj:'GO:0007126' "Violates GORULE:0000020, but was repaired" GeneDB LmjF.32.0020:mRNA LmjF.32.0020 GO:0007126 GO_REF:0000002 ISA UniProtKB:BFR1_YEAST P nuclear segregation protein, putative LmjF32.0020 transcript taxon:347515 20130911 GeneDB

#Line number RuleID ViolationType Message Line
#------------
#------------
# Validation for #6270 annotations in 6275 lines
#------------
#Line number RuleID ViolationType Message Line
#------------
# GO_AR:0000008 No annotations should be made to uninformative high level terms Warning count: 24
145 GO_AR:0000008 Warning Do not annotate to: GO:0006810 'transport' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate GeneDB LmjF.22.1350.2:mRNA LmjF.22.1350 GO:0006810 GO_REF:0000024 ISO GeneDB:Tb927.7.3350 P palmitoyl acyltransferase 11, putative LmjF22.1350 transcript taxon:347515 20110802 GeneDB
339 GO_AR:0000008 Warning Do not annotate to: GO:0006810 'transport' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate GeneDB LmjF.19.0800:mRNA ABCF2 GO:0006810 GO_REF:0000002 ISS P ABC transport system ATP-binding protein, putative LmjF19.0800 transcript taxon:347515 20090731 GeneDB
524 GO_AR:0000008 Warning Do not annotate to: GO:0006810 'transport' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate GeneDB LmjF.33.0230:mRNA LmjF.33.0230 GO:0006810 PMID:19240115 ISO GeneDB:Tb927.10.10800 P palmitoyl acyltransferase 2, putative LmjF33.0230 transcript taxon:347515 20110620 GeneDB
693 GO_AR:0000008 Warning Do not annotate to: GO:0006810 'transport' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate GeneDB LmjF.25.2280:mRNA LmjF.25.2280 GO:0006810 PMID:19240115 ISO GeneDB:Tb927.3.2400 P palmitoyl acyltransferase 10, putative LmjF25.2280 transcript taxon:347515 20110802 GeneDB
770 GO_AR:0000008 Warning Do not annotate to: GO:0006810 'transport' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate GeneDB LmjF.21.1390:mRNA LmjF.21.1390 GO:0006810 PMID:19240115 ISO GeneDB:Tb927.10.690 P palmitoyl acyltransferase 3, putative LmjF21.1390 transcript taxon:347515 20110620 GeneDB
929 GO_AR:0000008 Warning Do not annotate to: GO:0006810 'transport' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate GeneDB LmjF.02.0110:mRNA LmjF.02.0110 GO:0006810 GO_REF:0000012 ISA UniProtKB:O43592 P tRNA exportin, putative LmjF02.0110 transcript taxon:347515 20140507 GeneDB
1453 GO_AR:0000008 Warning Do not annotate to: GO:0006810 'transport' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate GeneDB LmjF.11.1090:mRNA LmjF.11.1090 GO:0006810 PMID:19240115 ISO GeneDB:Tb11.02.4090 P palmitoyl acyltransferase 7, putative LmjF11.1090 transcript taxon:347515 20110817 GeneDB
1590 GO_AR:0000008 Warning Do not annotate to: GO:0006810 'transport' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate GeneDB LmjF.11.1080:mRNA LmjF.11.1080 GO:0006810 PMID:19240115 ISO GeneDB:Tb11.02.4090 P palmitoyl acyltransferase 7, putative LmjF11.1080 transcript taxon:347515 20110817 GeneDB
1702 GO_AR:0000008 Warning Do not annotate to: GO:0006810 'transport' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate GeneDB LmjF.09.0640:mRNA LmjF.09.0640 GO:0006810 PMID:19240115 ISO GeneDB:Tb11.01.4490 P palmitoyl acyltransferase 5, putative LmjF09.0640 transcript taxon:347515 20110725 GeneDB
1849 GO_AR:0000008 Warning Do not annotate to: GO:0008152 'metabolic process' The term is considered to high level, as marked via the subset tag: gocheck_do_not_manually_annotate GeneDB LmjF.32.1960:mRNA LmjF.32.1960 GO:0008152 GO_REF:0000002 ISS P 1-acyl-sn-glycerol-3-phosphateacyltransferase-like protein, putative LmjF32.1960 transcript taxon:347515 20180531 GeneDB
1931 GO_AR:0000008 Warning Do not annotate to: GO:0016049 'cell growth' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate GeneDB LmjF.32.0390:mRNA Rpn8 GO:0016049 GO_REF:0000024 ISO GeneDB:Tb927.10.14530 P 19S proteasome non-atpase subunit 8 LmjF32.0390 transcript taxon:347515 20090731 GeneDB
1968 GO_AR:0000008 Warning Do not annotate to: GO:0006810 'transport' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate GeneDB LmjF.13.0650:mRNA PAT6 GO:0006810 GO_REF:0000002 ISO GeneDB:Tb11.02.1710 P palmitoyl acyltransferase 6, putative LmjF13.0650 transcript taxon:347515 20110725 GeneDB
2125 GO_AR:0000008 Warning Do not annotate to: GO:0043492 'ATPase activity, coupled to movement of substances' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate GeneDB LmjF.03.0160:mRNA ABCF1 GO:0043492 PMID:17030997 ISM F ATP-binding cassette protein subfamily F, member 1, putative LmjF03.0160 transcript taxon:347515 20090608 GeneDB
2620 GO_AR:0000008 Warning Do not annotate to: GO:0016049 'cell growth' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate GeneDB LmjF.25.0960:mRNA TUBG GO:0016049 GO_REF:0000024 ISO GeneDB:Tb927.3.910 P tubulin gamma chain LmjF25.0960 transcript taxon:347515 20141210 GeneDB
3471 GO_AR:0000008 Warning Do not annotate to: GO:0006810 'transport' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate GeneDB LmjF.28.1890:mRNA LmjF.28.1890 GO:0006810 PMID:19240115 ISO GeneDB:Tb11.01.0810 P palmitoyl acyltransferase 4, putative LmjF28.1890 transcript taxon:347515 20110802 GeneDB
3676 GO_AR:0000008 Warning Do not annotate to: GO:0007049 'cell cycle' The term is considered to high level, as marked via the subset tag: gocheck_do_not_manually_annotate GeneDB LmjF.21.1080:mRNA CRK1 GO:0007049 GO_REF:0000002 ISO GeneDB:TcCLB.504181.40 P cdc2-related kinase 1 LmjF21.1080 transcript taxon:347515 20170303 GeneDB
3729 GO_AR:0000008 Warning Do not annotate to: GO:0006810 'transport' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate GeneDB LmjF.22.1350.1:mRNA LmjF.22.1350 GO:0006810 GO_REF:0000024 ISO GeneDB:Tb927.7.3350 P palmitoyl acyltransferase 11, putative LmjF22.1350 transcript taxon:347515 20110802 GeneDB
3766 GO_AR:0000008 Warning Do not annotate to: GO:0006810 'transport' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate GeneDB LmjF.23.1420:mRNA LmjF.23.1420 GO:0006810 PMID:19240115 ISO GeneDB:Tb927.8.3400 P palmitoyl acyltransferase 12, putative LmjF23.1420 transcript taxon:347515 20110802 GeneDB
3850 GO_AR:0000008 Warning Do not annotate to: GO:0008152 'metabolic process' The term is considered to high level, as marked via the subset tag: gocheck_do_not_manually_annotate GeneDB LmjF.36.0150:mRNA LmjF.36.0150 GO:0008152 GO_REF:0000011 ISM InterPro:IPR001345 P 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatas, putative LmjF36.0150 transcript taxon:347515 20090731 GeneDB
4307 GO_AR:0000008 Warning Do not annotate to: GO:0006810 'transport' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate GeneDB LmjF.21.1400:mRNA LmjF.21.1400 GO:0006810 PMID:19240115 ISO GeneDB:Tb927.10.690 P palmitoyl acyltransferase 3, putative LmjF21.1400 transcript taxon:347515 20110620 GeneDB
4314 GO_AR:0000008 Warning Do not annotate to: GO:0016049 'cell growth' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate GeneDB LmjF.34.0650:mRNA RPN11 GO:0016049 GO_REF:0000024 ISO GeneDB:Tb927.10.2980 P proteasome regulatory non-ATPase subunit 11, putative LmjF34.0650 transcript taxon:347515 20090731 GeneDB
4726 GO_AR:0000008 Warning Do not annotate to: GO:0006810 'transport' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate GeneDB LmjF.25.0530:mRNA ABCT GO:0006810 GO_REF:0000024 ISS Pfam:PF00005 P multidrug resistance protein, mitochondrial, putative LmjF25.0530 transcript taxon:347515 20140507 GeneDB
4965 GO_AR:0000008 Warning Do not annotate to: GO:0006810 'transport' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate GeneDB LmjF.28.0220:mRNA LmjF.28.0220 GO:0006810 PMID:19240115 ISO GeneDB:Tb11.02.5260 P palmitoyl acyltransferase 9, putative LmjF28.0220 transcript taxon:347515 20110725 GeneDB
5256 GO_AR:0000008 Warning Do not annotate to: GO:0006810 'transport' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate GeneDB LmjF.04.0520:mRNA LmjF.04.0520 GO:0006810 PMID:19240115 ISS P palmitoyl acyltransferase 1, putative LmjF04.0520 transcript taxon:347515 20180531 GeneDB
#------------

GO:0005622 intracellular AnnotationPropagation C GO:0035735 intraciliary transport involved in cilium assembly ISO
GO:0005623 cell AnnotationPropagation C GO:0035735 intraciliary transport involved in cilium assembly ISO
GO:0005929 cilium AnnotationPropagation C GO:0035735 intraciliary transport involved in cilium assembly ISO
GO:1903508 positive regulation of nucleic acid-templated transcription AnnotationPropagation P GO:0003713 transcription coactivator activity ISS
GO:1903506 regulation of nucleic acid-templated transcription AnnotationPropagation P GO:0003712 transcription coregulator activity ISO
GO:0005622 intracellular AnnotationPropagation C GO:0030150 protein import into mitochondrial matrix ISO
GO:0005623 cell AnnotationPropagation C GO:0030150 protein import into mitochondrial matrix ISO
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0004352 glutamate dehydrogenase (NAD+) activity IDA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0042626 ATPase activity, coupled to transmembrane movement of substances ISM
GO:0016311 dephosphorylation AnnotationPropagation P GO:0042132 fructose 1,6-bisphosphate 1-phosphatase activity IDA
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0045174 glutathione dehydrogenase (ascorbate) activity IDA
GO:0098869 cellular oxidant detoxification AnnotationPropagation P GO:0045174 glutathione dehydrogenase (ascorbate) activity IDA
GO:0005623 cell AnnotationPropagation C GO:0006882 cellular zinc ion homeostasis ISO
GO:0005622 intracellular AnnotationPropagation C GO:0006406 mRNA export from nucleus ISO
GO:0005623 cell AnnotationPropagation C GO:0006406 mRNA export from nucleus ISO
GO:1901642 nucleoside transmembrane transport AnnotationPropagation P GO:0005337 nucleoside transmembrane transporter activity ISO
GO:0006508 proteolysis AnnotationPropagation P GO:0004222 metalloendopeptidase activity ISO
GO:0055085 transmembrane transport AnnotationPropagation P GO:0042626 ATPase activity, coupled to transmembrane movement of substances ISM
GO:0046854 phosphatidylinositol phosphorylation AnnotationPropagation P GO:0016303 1-phosphatidylinositol-3-kinase activity ISO
GO:0036092 phosphatidylinositol-3-phosphate biosynthetic process AnnotationPropagation P GO:0016303 1-phosphatidylinositol-3-kinase activity ISO
GO:0055085 transmembrane transport AnnotationPropagation P GO:0042626 ATPase activity, coupled to transmembrane movement of substances ISM
GO:0006508 proteolysis AnnotationPropagation P GO:0016920 pyroglutamyl-peptidase activity IDA
GO:0097502 mannosylation AnnotationPropagation P GO:0000009 alpha-1,6-mannosyltransferase activity ISO
GO:0006355 regulation of transcription, DNA-templated AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity ISM
GO:0006468 protein phosphorylation AnnotationPropagation P GO:0004674 protein serine/threonine kinase activity ISM
GO:0005622 intracellular AnnotationPropagation C GO:0035735 intraciliary transport involved in cilium assembly ISO
GO:0005623 cell AnnotationPropagation C GO:0035735 intraciliary transport involved in cilium assembly ISO
GO:0005929 cilium AnnotationPropagation C GO:0035735 intraciliary transport involved in cilium assembly ISO
GO:0097502 mannosylation AnnotationPropagation P GO:0000026 alpha-1,2-mannosyltransferase activity ISO
GO:0006470 protein dephosphorylation AnnotationPropagation P GO:0004721 phosphoprotein phosphatase activity ISA
GO:0006468 protein phosphorylation AnnotationPropagation P GO:0004674 protein serine/threonine kinase activity ISS
GO:0015798 myo-inositol transport AnnotationPropagation P GO:0005365 myo-inositol transmembrane transporter activity IDA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0005365 myo-inositol transmembrane transporter activity IDA
GO:0006508 proteolysis AnnotationPropagation P GO:0004197 cysteine-type endopeptidase activity ISM
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015205 nucleobase transmembrane transporter activity IDA
GO:0015851 nucleobase transport AnnotationPropagation P GO:0015205 nucleobase transmembrane transporter activity IDA
GO:0032774 RNA biosynthetic process AnnotationPropagation P GO:0003899 DNA-directed 5'-3' RNA polymerase activity ISM
GO:0006657 CDP-choline pathway AnnotationPropagation P GO:0004142 diacylglycerol cholinephosphotransferase activity ISO
GO:0005622 intracellular AnnotationPropagation C GO:0035721 intraciliary retrograde transport ISO
GO:0005623 cell AnnotationPropagation C GO:0035721 intraciliary retrograde transport ISO
GO:0005929 cilium AnnotationPropagation C GO:0035721 intraciliary retrograde transport ISO
GO:0090305 nucleic acid phosphodiester bond hydrolysis AnnotationPropagation P GO:0004519 endonuclease activity ISO
GO:0006508 proteolysis AnnotationPropagation P GO:0008234 cysteine-type peptidase activity EXP
GO:0005622 intracellular AnnotationPropagation C GO:0035720 intraciliary anterograde transport ISO
GO:0005623 cell AnnotationPropagation C GO:0035720 intraciliary anterograde transport ISO
GO:0005929 cilium AnnotationPropagation C GO:0035720 intraciliary anterograde transport ISO
GO:0022900 electron transport chain AnnotationPropagation P GO:0004129 cytochrome-c oxidase activity ISO
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0004129 cytochrome-c oxidase activity ISO
GO:0032774 RNA biosynthetic process AnnotationPropagation P GO:0003899 DNA-directed 5'-3' RNA polymerase activity ISO
GO:0046854 phosphatidylinositol phosphorylation AnnotationPropagation P GO:0016307 phosphatidylinositol phosphate kinase activity ISO
GO:0006468 protein phosphorylation AnnotationPropagation P GO:0004672 protein kinase activity ISO
GO:0016310 phosphorylation AnnotationPropagation P GO:0050201 fucokinase activity IMP
GO:0015755 fructose transmembrane transport AnnotationPropagation P GO:0005353 fructose transmembrane transporter activity ISO
GO:0005622 intracellular AnnotationPropagation C GO:0006406 mRNA export from nucleus ISO
GO:0005623 cell AnnotationPropagation C GO:0006406 mRNA export from nucleus ISO
GO:0006508 proteolysis AnnotationPropagation P GO:0004181 metallocarboxypeptidase activity ISO
GO:0005623 cell AnnotationPropagation C GO:0045454 cell redox homeostasis ISO
GO:0055085 transmembrane transport AnnotationPropagation P GO:0042626 ATPase activity, coupled to transmembrane movement of substances ISM
GO:1904659 glucose transmembrane transport AnnotationPropagation P GO:0055056 D-glucose transmembrane transporter activity ISO
GO:0055085 transmembrane transport AnnotationPropagation P GO:0042626 ATPase activity, coupled to transmembrane movement of substances ISM
GO:0006468 protein phosphorylation AnnotationPropagation P GO:0004674 protein serine/threonine kinase activity ISM
GO:0016310 phosphorylation AnnotationPropagation P GO:0008887 glycerate kinase activity RCA
GO:0005622 intracellular AnnotationPropagation C GO:0006626 protein targeting to mitochondrion ISO
GO:0005623 cell AnnotationPropagation C GO:0006626 protein targeting to mitochondrion ISO
GO:0016311 dephosphorylation AnnotationPropagation P GO:0008254 3'-nucleotidase activity ISO
GO:0071806 protein transmembrane transport AnnotationPropagation P GO:0008320 protein transmembrane transporter activity ISA
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0051920 peroxiredoxin activity IDA
GO:0098869 cellular oxidant detoxification AnnotationPropagation P GO:0051920 peroxiredoxin activity IDA
GO:0016310 phosphorylation AnnotationPropagation P GO:0016301 kinase activity ISO
GO:0055085 transmembrane transport AnnotationPropagation P GO:0042626 ATPase activity, coupled to transmembrane movement of substances ISM
GO:0022900 electron transport chain AnnotationPropagation P GO:0008121 ubiquinol-cytochrome-c reductase activity ISS
GO:0035435 phosphate ion transmembrane transport AnnotationPropagation P GO:0015321 sodium-dependent phosphate transmembrane transporter activity ISO
GO:0044341 sodium-dependent phosphate transport AnnotationPropagation P GO:0015321 sodium-dependent phosphate transmembrane transporter activity ISO
GO:0005622 intracellular AnnotationPropagation C GO:0035720 intraciliary anterograde transport ISO
GO:0005623 cell AnnotationPropagation C GO:0035720 intraciliary anterograde transport ISO
GO:0005929 cilium AnnotationPropagation C GO:0035720 intraciliary anterograde transport ISO
GO:0070588 calcium ion transmembrane transport AnnotationPropagation P GO:0015085 calcium ion transmembrane transporter activity ISO
GO:0005622 intracellular AnnotationPropagation C GO:0035735 intraciliary transport involved in cilium assembly ISO
GO:0005623 cell AnnotationPropagation C GO:0035735 intraciliary transport involved in cilium assembly ISO
GO:0005929 cilium AnnotationPropagation C GO:0035735 intraciliary transport involved in cilium assembly ISO
GO:0005622 intracellular AnnotationPropagation C GO:0006626 protein targeting to mitochondrion ISO
GO:0005623 cell AnnotationPropagation C GO:0006626 protein targeting to mitochondrion ISO
GO:0000413 protein peptidyl-prolyl isomerization AnnotationPropagation P GO:0003755 peptidyl-prolyl cis-trans isomerase activity ISO
GO:0032774 RNA biosynthetic process AnnotationPropagation P GO:0003899 DNA-directed 5'-3' RNA polymerase activity ISO
GO:0055085 transmembrane transport AnnotationPropagation P GO:0042626 ATPase activity, coupled to transmembrane movement of substances ISM
GO:0005739 mitochondrion AnnotationPropagation C GO:0034551 mitochondrial respiratory chain complex III assembly ISO
GO:0005622 intracellular AnnotationPropagation C GO:0038203 TORC2 signaling ISO
GO:0006508 proteolysis AnnotationPropagation P GO:0070012 oligopeptidase activity IMP
GO:0005622 intracellular AnnotationPropagation C GO:0006406 mRNA export from nucleus ISO
GO:0005623 cell AnnotationPropagation C GO:0006406 mRNA export from nucleus ISO
GO:0035246 peptidyl-arginine N-methylation AnnotationPropagation P GO:0016274 protein-arginine N-methyltransferase activity IMP
GO:0090305 nucleic acid phosphodiester bond hydrolysis AnnotationPropagation P GO:0004527 exonuclease activity ISM
GO:0097502 mannosylation AnnotationPropagation P GO:0000026 alpha-1,2-mannosyltransferase activity ISO
GO:0032259 methylation AnnotationPropagation P GO:0016273 arginine N-methyltransferase activity ISO
GO:0005622 intracellular AnnotationPropagation C GO:0035735 intraciliary transport involved in cilium assembly ISO
GO:0005623 cell AnnotationPropagation C GO:0035735 intraciliary transport involved in cilium assembly ISO
GO:0005929 cilium AnnotationPropagation C GO:0035735 intraciliary transport involved in cilium assembly ISO
GO:0055085 transmembrane transport AnnotationPropagation P GO:0042626 ATPase activity, coupled to transmembrane movement of substances ISM
GO:0005622 intracellular AnnotationPropagation C GO:0035721 intraciliary retrograde transport ISO
GO:0005623 cell AnnotationPropagation C GO:0035721 intraciliary retrograde transport ISO
GO:0005929 cilium AnnotationPropagation C GO:0035721 intraciliary retrograde transport ISO
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0016972 thiol oxidase activity ISO
GO:0005739 mitochondrion AnnotationPropagation C GO:0006390 mitochondrial transcription ISO
GO:0034968 histone lysine methylation AnnotationPropagation P GO:0018024 histone-lysine N-methyltransferase activity ISO
GO:0016310 phosphorylation AnnotationPropagation P GO:0051736 ATP-dependent polyribonucleotide 5'-hydroxyl-kinase activity ISA
GO:0005622 intracellular AnnotationPropagation C GO:0035735 intraciliary transport involved in cilium assembly ISO
GO:0005623 cell AnnotationPropagation C GO:0035735 intraciliary transport involved in cilium assembly ISO
GO:0005929 cilium AnnotationPropagation C GO:0035735 intraciliary transport involved in cilium assembly ISO
GO:0032774 RNA biosynthetic process AnnotationPropagation P GO:0003899 DNA-directed 5'-3' RNA polymerase activity ISO
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0008398 sterol 14-demethylase activity ISO
GO:0070988 demethylation AnnotationPropagation P GO:0008398 sterol 14-demethylase activity ISO
GO:0097502 mannosylation AnnotationPropagation P GO:0004584 dolichyl-phosphate-mannose-glycolipid alpha-mannosyltransferase activity ISO
GO:0006508 proteolysis AnnotationPropagation P GO:0008234 cysteine-type peptidase activity EXP
GO:0016567 protein ubiquitination AnnotationPropagation P GO:0004842 ubiquitin-protein transferase activity ISA
GO:0005622 intracellular AnnotationPropagation C GO:0035735 intraciliary transport involved in cilium assembly ISO
GO:0005623 cell AnnotationPropagation C GO:0035735 intraciliary transport involved in cilium assembly ISO
GO:0005929 cilium AnnotationPropagation C GO:0035735 intraciliary transport involved in cilium assembly ISO
GO:0006096 glycolytic process AnnotationPropagation P GO:0004743 pyruvate kinase activity RCA
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0004657 proline dehydrogenase activity ISM
GO:0006508 proteolysis AnnotationPropagation P GO:0004198 calcium-dependent cysteine-type endopeptidase activity ISM
GO:0005623 cell AnnotationPropagation C GO:0006874 cellular calcium ion homeostasis ISO
GO:0097502 mannosylation AnnotationPropagation P GO:0000026 alpha-1,2-mannosyltransferase activity ISO
GO:0055085 transmembrane transport AnnotationPropagation P GO:0042626 ATPase activity, coupled to transmembrane movement of substances ISM
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0030611 arsenate reductase activity IDA
GO:0050790 regulation of catalytic activity AnnotationPropagation P GO:0043763 UTP:glucose-1-phosphate uridylyltransferase regulator activity IDA
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0016491 oxidoreductase activity ISO
GO:0035335 peptidyl-tyrosine dephosphorylation AnnotationPropagation P GO:0004725 protein tyrosine phosphatase activity IDA
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0004029 aldehyde dehydrogenase (NAD) activity ISO
GO:0019722 calcium-mediated signaling AnnotationPropagation P GO:0005220 inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity ISO
GO:0051209 release of sequestered calcium ion into cytosol AnnotationPropagation P GO:0005220 inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity ISO
GO:0048016 inositol phosphate-mediated signaling AnnotationPropagation P GO:0005220 inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity ISO
GO:0005623 cell AnnotationPropagation C GO:0045454 cell redox homeostasis ISO
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0015506 nucleoside:proton symporter activity ISO
GO:1901642 nucleoside transmembrane transport AnnotationPropagation P GO:0015506 nucleoside:proton symporter activity ISO
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0004155 6,7-dihydropteridine reductase activity IDA
GO:0000413 protein peptidyl-prolyl isomerization AnnotationPropagation P GO:0003755 peptidyl-prolyl cis-trans isomerase activity ISO
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0051920 peroxiredoxin activity IDA
GO:0098869 cellular oxidant detoxification AnnotationPropagation P GO:0051920 peroxiredoxin activity IDA
GO:0005622 intracellular AnnotationPropagation C GO:0007264 small GTPase mediated signal transduction ISM
GO:0006508 proteolysis AnnotationPropagation P GO:0070012 oligopeptidase activity ISO
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0003885 D-arabinono-1,4-lactone oxidase activity ISO
GO:0090305 nucleic acid phosphodiester bond hydrolysis AnnotationPropagation P GO:0004527 exonuclease activity ISM
GO:0016311 dephosphorylation AnnotationPropagation P GO:0042577 lipid phosphatase activity IDA
GO:0006259 DNA metabolic process AnnotationPropagation P GO:0004529 exodeoxyribonuclease activity ISM
GO:0090305 nucleic acid phosphodiester bond hydrolysis AnnotationPropagation P GO:0004529 exodeoxyribonuclease activity ISM
GO:0015761 mannose transmembrane transport AnnotationPropagation P GO:0015578 mannose transmembrane transporter activity ISO
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0008137 NADH dehydrogenase (ubiquinone) activity ISS
GO:0005622 intracellular AnnotationPropagation C GO:0035735 intraciliary transport involved in cilium assembly ISO
GO:0005623 cell AnnotationPropagation C GO:0035735 intraciliary transport involved in cilium assembly ISO
GO:0005929 cilium AnnotationPropagation C GO:0035735 intraciliary transport involved in cilium assembly ISO
GO:0016310 phosphorylation AnnotationPropagation P GO:0004305 ethanolamine kinase activity IDA
GO:1903830 magnesium ion transmembrane transport AnnotationPropagation P GO:0015095 magnesium ion transmembrane transporter activity EXP
GO:0006508 proteolysis AnnotationPropagation P GO:0008241 peptidyl-dipeptidase activity ISO
GO:0032508 DNA duplex unwinding AnnotationPropagation P GO:0004003 ATP-dependent DNA helicase activity ISO
GO:0072334 UDP-galactose transmembrane transport AnnotationPropagation P GO:0005459 UDP-galactose transmembrane transporter activity IGI