Table of contents

Summary

GAF Parser Summary

There are 32 GAF parser warnings.

GAF summary

Found 4788 annotations in 4796 lines.

GAF Validation Summary Errors are reported first.

For rule GO_AR:0000003 (http://www.geneontology.org/GO.annotation_qc.shtml#GO_AR:0000003) Annotations to 'binding ; GO:0005488' and 'protein binding ; GO:0005515' should be made with IPI and an interactor in the 'with' field, there are 10 violations with type Warning.

For rule GO_AR:0000008 (http://www.geneontology.org/GO.annotation_qc.shtml#GO_AR:0000008) No annotations should be made to uninformative high level terms, there is one violation with type Warning.

GAF Prediction Summary

Found 346 predictions, see prediction file for details.

Used Ontology Summary

go/extensions/go-gaf

Report

SUMMARY

STATISTICS

MESSAGES

ERROR

WARNING

OWLTools check

#Line number RuleID ViolationType Message Line
#------------
# GAF Parser ERROR count: 0
#------------
# GAF Parser WARNING count: 32
381 WARNING Repairing qualifier 'contributes_to' from: CONTRIBUTES_TO EcoGene EG10134 carA CONTRIBUTES_TO GO:0004088 PMID:21873635 IBA EcoGene:EG10134|PANTHER:PTN000150382|SGD:S000005829|UniProtKB:Q9LVW7 F Carbamoyl-phosphate synthase small chain UniProtKB:P0A6F1|PTN000892052 protein taxon:83333 20170228 GO_Central
497 WARNING Repairing qualifier 'contributes_to' from: CONTRIBUTES_TO EcoGene EG10682 pabA CONTRIBUTES_TO GO:0004049 PMID:21873635 IBA EcoGene:EG11027|PANTHER:PTN000230074|PomBase:SPBC1539.09c|SGD:S000001694|TAIR:locus:2174378|UniProtKB:P09786|UniProtKB:P20576|UniProtKB:P28819|UniProtKB:Q42565|UniProtKB:Q764B9|UniProtKB:Q7XUS2 F Aminodeoxychorismate synthase component 2 UniProtKB:P00903|PTN000230121 protein taxon:83333 20170228 GO_Central
609 WARNING Repairing qualifier 'contributes_to' from: CONTRIBUTES_TO EcoGene EG12087 nuoG CONTRIBUTES_TO GO:0008137 PMID:21873635 IBA PANTHER:PTN000177461|UniProtKB:P28331 F NADH-quinone oxidoreductase subunit G UniProtKB:P33602|PTN000906907 protein taxon:83333 20180323 GO_Central
745 WARNING Repairing qualifier 'contributes_to' from: CONTRIBUTES_TO EcoGene EG10104 atpG CONTRIBUTES_TO GO:0046961 PMID:21873635 IBA EcoGene:EG10104|PANTHER:PTN000190379|SGD:S000000243 F ATP synthase gamma chain UniProtKB:P0ABA6|PTN000190474 protein taxon:83333 20180509 GO_Central
788 WARNING Repairing qualifier 'contributes_to' from: CONTRIBUTES_TO EcoGene EG10098 atpA CONTRIBUTES_TO GO:0016887 PMID:21873635 IBA PANTHER:PTN000389891|RGD:619993|SGD:S000000195|UniProtKB:P25705 F ATP synthase subunit alpha UniProtKB:P0ABB0|PTN001032648 protein taxon:83333 20180504 GO_Central
1028 WARNING Repairing qualifier 'contributes_to' from: CONTRIBUTES_TO EcoGene EG10686 parC CONTRIBUTES_TO GO:0003918 PMID:21873635 IBA EcoGene:EG10423|EcoGene:EG10686|PANTHER:PTN001607041|UniProtKB:O67108|UniProtKB:P9WG47|UniProtKB:Q9HUK1 F DNA topoisomerase 4 subunit A UniProtKB:P0AFI2|PTN000018881 protein taxon:83333 20170421 GO_Central
1066 WARNING Repairing qualifier 'contributes_to' from: CONTRIBUTES_TO EcoGene EG10100 atpC CONTRIBUTES_TO GO:0046933 PMID:21873635 IBA EcoGene:EG10100|PANTHER:PTN000352454|SGD:S000002162 F ATP synthase epsilon chain UniProtKB:P0A6E6|PTN000352535 protein taxon:83333 20170228 GO_Central
1361 WARNING Repairing qualifier 'contributes_to' from: CONTRIBUTES_TO EcoGene EG10996 tgt CONTRIBUTES_TO GO:0008479 PMID:21873635 IBA EcoGene:EG10996|PANTHER:PTN000239043 F Queuine tRNA-ribosyltransferase UniProtKB:P0A847|PTN001845341 protein taxon:83333 20170228 GO_Central
1468 WARNING Repairing qualifier 'contributes_to' from: CONTRIBUTES_TO EcoGene EG10103 atpF CONTRIBUTES_TO GO:0046961 PMID:21873635 IBA EcoGene:EG10103|PANTHER:PTN002124753 F ATP synthase subunit b UniProtKB:P0ABA0|PTN002124823 protein taxon:83333 20180110 GO_Central
1742 WARNING Repairing qualifier 'contributes_to' from: CONTRIBUTES_TO EcoGene EG10536 livF CONTRIBUTES_TO GO:0015658 PMID:21873635 IBA EcoGene:EG10536|PANTHER:PTN000657089 F High-affinity branched-chain amino acid transport ATP-binding protein LivF UniProtKB:P22731|PTN000657143 protein taxon:83333 20170421 GO_Central
1782 WARNING Repairing qualifier 'colocalizes_with' from: COLOCALIZES_WITH EcoGene EG13141 dinB COLOCALIZES_WITH GO:0090734 PMID:21873635 IBA PANTHER:PTN000117876|UniProtKB:Q9UBT6 C DNA polymerase IV UniProtKB:Q47155|PTN000118193 protein taxon:83333 20180216 GO_Central
2061 WARNING Repairing qualifier 'contributes_to' from: CONTRIBUTES_TO EcoGene EG10894 rpoB CONTRIBUTES_TO GO:0003899 PMID:21873635 IBA PANTHER:PTN000465875|PomBase:SPAC23G3.01|RGD:620822 F DNA-directed RNA polymerase subunit beta UniProtKB:P0A8V2|PTN000466111 protein taxon:83333 20170228 GO_Central
2192 WARNING Repairing qualifier 'contributes_to' from: CONTRIBUTES_TO EcoGene EG12089 nuoI CONTRIBUTES_TO GO:0003954 PMID:21873635 IBA EcoGene:EG12089|PANTHER:PTN000091255|UniProtKB:O00217 F NADH-quinone oxidoreductase subunit I UniProtKB:P0AFD6|PTN000091341 protein taxon:83333 20180308 GO_Central
2415 WARNING Repairing qualifier 'contributes_to' from: CONTRIBUTES_TO EcoGene EG10179 cyoB CONTRIBUTES_TO GO:0004129 PMID:21873635 IBA FB:FBgn0013674|MGI:MGI:102504|PANTHER:PTN000046094|SGD:S000007260|UniProtKB:P00395|UniProtKB:Q9I3G0|UniProtKB:Q9I3G3 F Cytochrome bo(3) ubiquinol oxidase subunit 1 UniProtKB:P0ABI8|PTN000823960 protein taxon:83333 20170228 GO_Central
2528 WARNING Repairing qualifier 'contributes_to' from: CONTRIBUTES_TO EcoGene EG11027 trpGD CONTRIBUTES_TO GO:0004049 PMID:21873635 IBA EcoGene:EG11027|PANTHER:PTN000230074|PomBase:SPBC1539.09c|SGD:S000001694|TAIR:locus:2174378|UniProtKB:P09786|UniProtKB:P20576|UniProtKB:P28819|UniProtKB:Q42565|UniProtKB:Q764B9|UniProtKB:Q7XUS2 F Bifunctional protein TrpGD UniProtKB:P00904|PTN001376727 protein taxon:83333 20170228 GO_Central
2819 WARNING Repairing qualifier 'contributes_to' from: CONTRIBUTES_TO EcoGene EG11773 nuoM CONTRIBUTES_TO GO:0003954 PMID:21873635 IBA EcoGene:EG11773|PANTHER:PTN000511780 F NADH-quinone oxidoreductase subunit M UniProtKB:P0AFE8|PTN000511850 protein taxon:83333 20170428 GO_Central
2968 WARNING Repairing qualifier 'contributes_to' from: CONTRIBUTES_TO EcoGene EG14216 hyfH CONTRIBUTES_TO GO:0003954 PMID:21873635 IBA EcoGene:EG12089|PANTHER:PTN000091255|UniProtKB:O00217 F Hydrogenase-4 component H UniProtKB:P77423|PTN000091346 protein taxon:83333 20180308 GO_Central
3016 WARNING Repairing qualifier 'contributes_to' from: CONTRIBUTES_TO EcoGene EG10710 pheT CONTRIBUTES_TO GO:0004826 PMID:21873635 IBA FB:FBgn0039175|PANTHER:PTN000101805|SGD:S000004050|UniProtKB:Q9NSD9 F Phenylalanine--tRNA ligase beta subunit UniProtKB:P07395|PTN000101931 protein taxon:83333 20170228 GO_Central
3039 WARNING Repairing qualifier 'contributes_to' from: CONTRIBUTES_TO EcoGene EG12087 nuoG CONTRIBUTES_TO GO:0003954 PMID:21873635 IBA EcoGene:EG12087|PANTHER:PTN000177461 F NADH-quinone oxidoreductase subunit G UniProtKB:P33602|PTN000906907 protein taxon:83333 20180323 GO_Central
3169 WARNING Repairing qualifier 'contributes_to' from: CONTRIBUTES_TO EcoGene EG10180 cyoC CONTRIBUTES_TO GO:0004129 PMID:21873635 IBA PANTHER:PTN000149995|PomBase:SPMIT.04|SGD:S000007283 F Cytochrome bo(3) ubiquinol oxidase subunit 3 UniProtKB:P0ABJ3|PTN000891824 protein taxon:83333 20170602 GO_Central
3236 WARNING Repairing qualifier 'contributes_to' from: CONTRIBUTES_TO EcoGene EG10954 sodB CONTRIBUTES_TO GO:0004784 PMID:21873635 IBA EcoGene:EG10954|PANTHER:PTN000150157|TAIR:locus:2166953|TAIR:locus:2176167|UniProtKB:P21276|UniProtKB:Q5VSB7 F Superoxide dismutase [Fe] UniProtKB:P0AGD3|PTN001349187 protein taxon:83333 20170421 GO_Central
3410 WARNING Repairing qualifier 'contributes_to' from: CONTRIBUTES_TO EcoGene EG12088 nuoH CONTRIBUTES_TO GO:0003954 PMID:21873635 IBA EcoGene:EG12088|PANTHER:PTN000153359 F NADH-quinone oxidoreductase subunit H UniProtKB:P0AFD4|PTN000893184 protein taxon:83333 20170228 GO_Central
3478 WARNING Repairing qualifier 'contributes_to' from: CONTRIBUTES_TO EcoGene EG10479 hycF CONTRIBUTES_TO GO:0003954 PMID:21873635 IBA EcoGene:EG12089|PANTHER:PTN000091255|UniProtKB:O00217 F Formate hydrogenlyase subunit 6 UniProtKB:P16432|PTN000852034 protein taxon:83333 20180308 GO_Central
3536 WARNING Repairing qualifier 'contributes_to' from: CONTRIBUTES_TO EcoGene EG10625 mutS CONTRIBUTES_TO GO:0032143 PMID:21873635 IBA PANTHER:PTN002260779|UniProtKB:P43246|UniProtKB:P52701 F DNA mismatch repair protein MutS UniProtKB:P23909|PTN000145849 protein taxon:83333 20180524 GO_Central
3643 WARNING Repairing qualifier 'colocalizes_with' from: COLOCALIZES_WITH EcoGene EG11128 yciH COLOCALIZES_WITH GO:0005840 PMID:21873635 IBA PANTHER:PTN000300443|SGD:S000003775 C Uncharacterized protein YciH UniProtKB:P08245|PTN001400375 protein taxon:83333 20170228 GO_Central
4113 WARNING Repairing qualifier 'contributes_to' from: CONTRIBUTES_TO EcoGene EG10423 gyrA CONTRIBUTES_TO GO:0003918 PMID:21873635 IBA EcoGene:EG10423|EcoGene:EG10686|PANTHER:PTN001607041|UniProtKB:O67108|UniProtKB:P9WG47|UniProtKB:Q9HUK1 F DNA gyrase subunit A UniProtKB:P0AES4|PTN000018884 protein taxon:83333 20170421 GO_Central
4209 WARNING Repairing qualifier 'contributes_to' from: CONTRIBUTES_TO EcoGene EG12523 nrdG CONTRIBUTES_TO GO:0004748 PMID:21873635 IBA EcoGene:EG12523|PANTHER:PTN001576428 F Anaerobic ribonucleoside-triphosphate reductase-activating protein UniProtKB:P0A9N8|PTN001576432 protein taxon:83333 20170228 GO_Central
4220 WARNING Repairing qualifier 'contributes_to' from: CONTRIBUTES_TO EcoGene EG11025 trpB CONTRIBUTES_TO GO:0004834 PMID:21873635 IBA EcoGene:EG11025|PANTHER:PTN000034394|SGD:S000002994|TAIR:locus:2005543|TAIR:locus:2160190|UniProtKB:P9WFX9|UniProtKB:Q5AZP9 F Tryptophan synthase beta chain UniProtKB:P0A879|PTN000816647 protein taxon:83333 20170228 GO_Central
4324 WARNING Repairing qualifier 'contributes_to' from: CONTRIBUTES_TO EcoGene EG10178 cyoA CONTRIBUTES_TO GO:0004129 PMID:21873635 IBA PANTHER:PTN000527128|PomBase:SPMIT.11|SGD:S000007281|UniProtKB:P00403 F Cytochrome bo(3) ubiquinol oxidase subunit 2 UniProtKB:P0ABJ1|PTN000527184 protein taxon:83333 20170228 GO_Central
4419 WARNING Repairing qualifier 'contributes_to' from: CONTRIBUTES_TO EcoGene EG10895 rpoC CONTRIBUTES_TO GO:0003899 PMID:21873635 IBA FB:FBgn0003277|PANTHER:PTN000453461|RGD:620824 F DNA-directed RNA polymerase subunit beta' UniProtKB:P0A8T7|PTN001065896 protein taxon:83333 20170228 GO_Central
4428 WARNING Repairing qualifier 'contributes_to' from: CONTRIBUTES_TO EcoGene EG12083 nuoB CONTRIBUTES_TO GO:0003954 PMID:21873635 IBA EcoGene:EG12083|PANTHER:PTN000242188|UniProtKB:O75251 F NADH-quinone oxidoreductase subunit B UniProtKB:P0AFC7|PTN000242265 protein taxon:83333 20170616 GO_Central
4553 WARNING Repairing qualifier 'contributes_to' from: CONTRIBUTES_TO EcoGene EG10625 mutS CONTRIBUTES_TO GO:0032137 PMID:21873635 IBA MGI:MGI:101816|MGI:MGI:1343961|PANTHER:PTN002260779|SGD:S000001162|SGD:S000002504|SGD:S000005450|UniProtKB:P20585|UniProtKB:P43246|UniProtKB:P52701 F DNA mismatch repair protein MutS UniProtKB:P23909|PTN000145849 protein taxon:83333 20180524 GO_Central
#------------
#------------
# Validation for #4788 annotations in 4796 lines
#------------
#Line number RuleID ViolationType Message Line
#------------
# GO_AR:0000003 Annotations to 'binding ; GO:0005488' and 'protein binding ; GO:0005515' should be made with IPI and an interactor in the 'with' field Warning count: 10
212 GO_AR:0000003 Warning Annotations to 'binding' (GO:0005488) and 'protein binding' (GO:0005515) should be made with an IPI evidence code and the interactor in the 'with' field EcoGene EG13721 yccS GO:0005515 PMID:21873635 IBA EcoGene:EG11953|PANTHER:PTN002021271 F Inner membrane protein YccS UniProtKB:P75870|PTN001577038 protein taxon:83333 20170420 GO_Central
1432 GO_AR:0000003 Warning Annotations to 'binding' (GO:0005488) and 'protein binding' (GO:0005515) should be made with an IPI evidence code and the interactor in the 'with' field EcoGene EG11891 yeeA GO:0005515 PMID:21873635 IBA EcoGene:EG11953|PANTHER:PTN002021271 F Inner membrane protein YeeA UniProtKB:P33011|PTN002021269 protein taxon:83333 20170420 GO_Central
1507 GO_AR:0000003 Warning Annotations to 'binding' (GO:0005488) and 'protein binding' (GO:0005515) should be made with an IPI evidence code and the interactor in the 'with' field EcoGene EG11953 mdtO GO:0005515 PMID:21873635 IBA EcoGene:EG11953|PANTHER:PTN002021271 F Multidrug resistance protein MdtO UniProtKB:P32715|PTN001293374 protein taxon:83333 20170420 GO_Central
2071 GO_AR:0000003 Warning Annotations to 'binding' (GO:0005488) and 'protein binding' (GO:0005515) should be made with an IPI evidence code and the interactor in the 'with' field EcoGene EG12906 yhfK GO:0005515 PMID:21873635 IBA EcoGene:EG11953|PANTHER:PTN002021271 F Uncharacterized protein YhfK UniProtKB:P45537|PTN001577037 protein taxon:83333 20170420 GO_Central
2373 GO_AR:0000003 Warning Annotations to 'binding' (GO:0005488) and 'protein binding' (GO:0005515) should be made with an IPI evidence code and the interactor in the 'with' field EcoGene EG13141 dinB GO:0005515 PMID:21873635 IBA EcoGene:EG13141|MGI:MGI:1349767|PANTHER:PTN000117876|PomBase:SPCC553.07c F DNA polymerase IV UniProtKB:Q47155|PTN000118193 protein taxon:83333 20180216 GO_Central
2922 GO_AR:0000003 Warning Annotations to 'binding' (GO:0005488) and 'protein binding' (GO:0005515) should be made with an IPI evidence code and the interactor in the 'with' field EcoGene EG13945 ydhK GO:0005515 PMID:21873635 IBA EcoGene:EG11953|PANTHER:PTN002021271 F Uncharacterized transporter YdhK UniProtKB:P76186|PTN000775498 protein taxon:83333 20170420 GO_Central
3211 GO_AR:0000003 Warning Annotations to 'binding' (GO:0005488) and 'protein binding' (GO:0005515) should be made with an IPI evidence code and the interactor in the 'with' field EcoGene EG10833 recQ GO:0005515 PMID:21873635 IBA EcoGene:EG10833|PANTHER:PTN001787175 F ATP-dependent DNA helicase RecQ UniProtKB:P15043|PTN001009465 protein taxon:83333 20180411 GO_Central
4429 GO_AR:0000003 Warning Annotations to 'binding' (GO:0005488) and 'protein binding' (GO:0005515) should be made with an IPI evidence code and the interactor in the 'with' field EcoGene EG12181 grxD GO:0005515 PMID:21873635 IBA EcoGene:EG12181|MGI:MGI:1353653|PANTHER:PTN000033618|PomBase:SPAPB2B4.02|PomBase:SPBC26H8.06|TAIR:locus:2093297|TAIR:locus:2135363|UniProtKB:O76003|UniProtKB:Q86SX6 F Glutaredoxin 4 UniProtKB:P0AC69|PTN000033708 protein taxon:83333 20180514 GO_Central
4431 GO_AR:0000003 Warning Annotations to 'binding' (GO:0005488) and 'protein binding' (GO:0005515) should be made with an IPI evidence code and the interactor in the 'with' field EcoGene EG12822 aaeB GO:0005515 PMID:21873635 IBA EcoGene:EG11953|PANTHER:PTN002021271 F p-hydroxybenzoic acid efflux pump subunit AaeB UniProtKB:P46481|PTN000775499 protein taxon:83333 20170420 GO_Central
4630 GO_AR:0000003 Warning Annotations to 'binding' (GO:0005488) and 'protein binding' (GO:0005515) should be made with an IPI evidence code and the interactor in the 'with' field EcoGene EG20044 dctA GO:0005515 PMID:21873635 IBA EcoGene:EG20044|PANTHER:PTN000238506 F Aerobic C4-dicarboxylate transport protein UniProtKB:P0A830|PTN000238526 protein taxon:83333 20170608 GO_Central
#------------
# GO_AR:0000008 No annotations should be made to uninformative high level terms Warning count: 1
3489 GO_AR:0000008 Warning Do not annotate to: GO:0040007 'growth' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate EcoGene EG10098 atpA GO:0040007 PMID:21873635 IBA PANTHER:PTN000389972|UniProtKB:P9WPU7 P ATP synthase subunit alpha UniProtKB:P0ABB0|PTN001032648 protein taxon:83333 20180504 GO_Central
#------------

Predictions

GO:0046835 carbohydrate phosphorylation AnnotationPropagation P GO:0033863 ribose 1,5-bisphosphate phosphokinase activity IBA
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0009013 succinate-semialdehyde dehydrogenase [NAD(P)+] activity IBA
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0008131 primary amine oxidase activity IBA
GO:0044718 siderophore transmembrane transport AnnotationPropagation P GO:0015344 siderophore uptake transmembrane transporter activity IBA
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0004350 glutamate-5-semialdehyde dehydrogenase activity IBA
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0033743 peptide-methionine (R)-S-oxide reductase activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015288 porin activity IBA
GO:0006355 regulation of transcription, DNA-templated AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0046835 carbohydrate phosphorylation AnnotationPropagation P GO:0019200 carbohydrate kinase activity IBA
GO:0022900 electron transport chain AnnotationPropagation P GO:0009055 electron transfer activity IBA
GO:0046835 carbohydrate phosphorylation AnnotationPropagation P GO:0019200 carbohydrate kinase activity IBA
GO:0006508 proteolysis AnnotationPropagation P GO:0071972 peptidoglycan L,D-transpeptidase activity IBA
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0016491 oxidoreductase activity IBA
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0008720 D-lactate dehydrogenase activity IBA
GO:0042968 homoserine transport AnnotationPropagation P GO:0042970 homoserine transmembrane transporter activity IBA
GO:1902475 L-alpha-amino acid transmembrane transport AnnotationPropagation P GO:0042970 homoserine transmembrane transporter activity IBA
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IBA
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0033711 4-phosphoerythronate dehydrogenase activity IBA
GO:0016311 dephosphorylation AnnotationPropagation P GO:0016791 phosphatase activity IBA
GO:0016310 phosphorylation AnnotationPropagation P GO:0008804 carbamate kinase activity IBA
GO:0045892 negative regulation of transcription, DNA-templated AnnotationPropagation P GO:0001217 bacterial-type RNA polymerase transcriptional repressor activity, sequence-specific DNA binding IBA
GO:0070574 cadmium ion transmembrane transport AnnotationPropagation P GO:0015086 cadmium ion transmembrane transporter activity IBA
GO:0006413 translational initiation AnnotationPropagation P GO:0004479 methionyl-tRNA formyltransferase activity IBA
GO:0071951 conversion of methionyl-tRNA to N-formyl-methionyl-tRNA AnnotationPropagation P GO:0004479 methionyl-tRNA formyltransferase activity IBA
GO:0090305 nucleic acid phosphodiester bond hydrolysis AnnotationPropagation P GO:0008409 5'-3' exonuclease activity IBA
GO:0015706 nitrate transport AnnotationPropagation P GO:0015112 nitrate transmembrane transporter activity IBA
GO:0098656 anion transmembrane transport AnnotationPropagation P GO:0015112 nitrate transmembrane transporter activity IBA
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0009389 dimethyl sulfoxide reductase activity IBA
GO:0044718 siderophore transmembrane transport AnnotationPropagation P GO:0015344 siderophore uptake transmembrane transporter activity IBA
GO:0016310 phosphorylation AnnotationPropagation P GO:0004127 cytidylate kinase activity IBA
GO:0046940 nucleoside monophosphate phosphorylation AnnotationPropagation P GO:0004127 cytidylate kinase activity IBA
GO:0022900 electron transport chain AnnotationPropagation P GO:0009055 electron transfer activity IBA
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0008977 prephenate dehydrogenase (NAD+) activity IBA
GO:0006259 DNA metabolic process AnnotationPropagation P GO:0004520 endodeoxyribonuclease activity IBA
GO:0090305 nucleic acid phosphodiester bond hydrolysis AnnotationPropagation P GO:0004520 endodeoxyribonuclease activity IBA
GO:1902475 L-alpha-amino acid transmembrane transport AnnotationPropagation P GO:0015179 L-amino acid transmembrane transporter activity IBA
GO:0016310 phosphorylation AnnotationPropagation P GO:0004765 shikimate kinase activity IBA
GO:0016311 dephosphorylation AnnotationPropagation P GO:0043136 glycerol-3-phosphatase activity IBA
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0004096 catalase activity IBA
GO:0098869 cellular oxidant detoxification AnnotationPropagation P GO:0004096 catalase activity IBA
GO:0016310 phosphorylation AnnotationPropagation P GO:0008804 carbamate kinase activity IBA
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IBA
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0016618 hydroxypyruvate reductase activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015288 porin activity IBA
GO:0042886 amide transport AnnotationPropagation P GO:1904680 peptide transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:1904680 peptide transmembrane transporter activity IBA
GO:0015768 maltose transport AnnotationPropagation P GO:0015423 maltose-transporting ATPase activity IBA
GO:0034219 carbohydrate transmembrane transport AnnotationPropagation P GO:0015423 maltose-transporting ATPase activity IBA
GO:0015862 uridine transport AnnotationPropagation P GO:0015213 uridine transmembrane transporter activity IBA
GO:1901642 nucleoside transmembrane transport AnnotationPropagation P GO:0015213 uridine transmembrane transporter activity IBA
GO:0072531 pyrimidine-containing compound transmembrane transport AnnotationPropagation P GO:0015213 uridine transmembrane transporter activity IBA
GO:0006855 drug transmembrane transport AnnotationPropagation P GO:0015238 drug transmembrane transporter activity IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0005298 proline:sodium symporter activity IBA
GO:0035725 sodium ion transmembrane transport AnnotationPropagation P GO:0005298 proline:sodium symporter activity IBA
GO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic AnnotationPropagation P GO:0004523 RNA-DNA hybrid ribonuclease activity IBA
GO:0016311 dephosphorylation AnnotationPropagation P GO:0042132 fructose 1,6-bisphosphate 1-phosphatase activity IBA
GO:0018106 peptidyl-histidine phosphorylation AnnotationPropagation P GO:0004673 protein histidine kinase activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015453 oxidoreduction-driven active transmembrane transporter activity IBA
GO:0042886 amide transport AnnotationPropagation P GO:1904680 peptide transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:1904680 peptide transmembrane transporter activity IBA
GO:0018108 peptidyl-tyrosine phosphorylation AnnotationPropagation P GO:0004713 protein tyrosine kinase activity IBA
GO:0006177 GMP biosynthetic process AnnotationPropagation P GO:0003921 GMP synthase activity IBA
GO:0006508 proteolysis AnnotationPropagation P GO:0004175 endopeptidase activity IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0015385 sodium:proton antiporter activity IBA
GO:0035725 sodium ion transmembrane transport AnnotationPropagation P GO:0015385 sodium:proton antiporter activity IBA
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IBA
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0016491 oxidoreductase activity IBA
GO:0018108 peptidyl-tyrosine phosphorylation AnnotationPropagation P GO:0004713 protein tyrosine kinase activity IBA
GO:1903830 magnesium ion transmembrane transport AnnotationPropagation P GO:0015095 magnesium ion transmembrane transporter activity IBA
GO:0032508 DNA duplex unwinding AnnotationPropagation P GO:0043140 ATP-dependent 3'-5' DNA helicase activity IBA
GO:0016310 phosphorylation AnnotationPropagation P GO:0004020 adenylylsulfate kinase activity IBA
GO:0015826 threonine transport AnnotationPropagation P GO:0015565 threonine efflux transmembrane transporter activity IBA
GO:0006855 drug transmembrane transport AnnotationPropagation P GO:0015565 threonine efflux transmembrane transporter activity IBA
GO:0098655 cation transmembrane transport AnnotationPropagation P GO:0015565 threonine efflux transmembrane transporter activity IBA
GO:1902475 L-alpha-amino acid transmembrane transport AnnotationPropagation P GO:0015565 threonine efflux transmembrane transporter activity IBA
GO:0006479 protein methylation AnnotationPropagation P GO:0036009 protein-glutamine N-methyltransferase activity IBA
GO:0005623 cell AnnotationPropagation C GO:0006883 cellular sodium ion homeostasis IBA
GO:0022900 electron transport chain AnnotationPropagation P GO:0009055 electron transfer activity IBA
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0008106 alcohol dehydrogenase (NADP+) activity IBA
GO:0015736 hexuronate transmembrane transport AnnotationPropagation P GO:0015134 hexuronate transmembrane transporter activity IBA
GO:0015778 hexuronide transport AnnotationPropagation P GO:0015134 hexuronate transmembrane transporter activity IBA
GO:0006412 translation AnnotationPropagation P GO:0003746 translation elongation factor activity IBA
GO:0006414 translational elongation AnnotationPropagation P GO:0003746 translation elongation factor activity IBA
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0016491 oxidoreductase activity IBA
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0004399 histidinol dehydrogenase activity IBA
GO:1903507 negative regulation of nucleic acid-templated transcription AnnotationPropagation P GO:0003714 transcription corepressor activity IBA
GO:1903826 arginine transmembrane transport AnnotationPropagation P GO:0015181 arginine transmembrane transporter activity IBA
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0008734 L-aspartate oxidase activity IBA
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0050577 GDP-L-fucose synthase activity IBA
GO:0042350 GDP-L-fucose biosynthetic process AnnotationPropagation P GO:0050577 GDP-L-fucose synthase activity IBA
GO:0106004 tRNA (guanine-N7)-methylation AnnotationPropagation P GO:0008176 tRNA (guanine-N7-)-methyltransferase activity IBA
GO:0006508 proteolysis AnnotationPropagation P GO:0008233 peptidase activity IBA
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0008942 nitrite reductase [NAD(P)H] activity IBA
GO:0006508 proteolysis AnnotationPropagation P GO:0004175 endopeptidase activity IBA
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0052890 oxidoreductase activity, acting on the CH-CH group of donors, with a flavin as acceptor IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0015299 solute:proton antiporter activity IBA
GO:0006412 translation AnnotationPropagation P GO:0003746 translation elongation factor activity IBA
GO:0006414 translational elongation AnnotationPropagation P GO:0003746 translation elongation factor activity IBA
GO:0035442 dipeptide transmembrane transport AnnotationPropagation P GO:0071916 dipeptide transmembrane transporter activity IBA
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0016509 long-chain-3-hydroxyacyl-CoA dehydrogenase activity IBA
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0016722 oxidoreductase activity, oxidizing metal ions IBA
GO:0031167 rRNA methylation AnnotationPropagation P GO:0008650 rRNA (uridine-2'-O-)-methyltransferase activity IBA
GO:0005623 cell AnnotationPropagation C GO:0045454 cell redox homeostasis IBA
GO:0000160 phosphorelay signal transduction system AnnotationPropagation P GO:0000155 phosphorelay sensor kinase activity IBA
GO:0018106 peptidyl-histidine phosphorylation AnnotationPropagation P GO:0000155 phosphorelay sensor kinase activity IBA
GO:0023014 signal transduction by protein phosphorylation AnnotationPropagation P GO:0000155 phosphorelay sensor kinase activity IBA
GO:0006355 regulation of transcription, DNA-templated AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0015811 L-cystine transport AnnotationPropagation P GO:0015184 L-cystine transmembrane transporter activity IBA
GO:1902475 L-alpha-amino acid transmembrane transport AnnotationPropagation P GO:0015184 L-cystine transmembrane transporter activity IBA
GO:0043085 positive regulation of catalytic activity AnnotationPropagation P GO:0008047 enzyme activator activity IBA
GO:0035442 dipeptide transmembrane transport AnnotationPropagation P GO:0071916 dipeptide transmembrane transporter activity IBA
GO:0034414 tRNA 3'-trailer cleavage, endonucleolytic AnnotationPropagation P GO:0042781 3'-tRNA processing endoribonuclease activity IBA
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IBA
GO:0016310 phosphorylation AnnotationPropagation P GO:0016301 kinase activity IBA
GO:0042886 amide transport AnnotationPropagation P GO:1904680 peptide transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:1904680 peptide transmembrane transporter activity IBA
GO:0044718 siderophore transmembrane transport AnnotationPropagation P GO:0015344 siderophore uptake transmembrane transporter activity IBA
GO:0042886 amide transport AnnotationPropagation P GO:1904680 peptide transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:1904680 peptide transmembrane transporter activity IBA
GO:0006508 proteolysis AnnotationPropagation P GO:0004175 endopeptidase activity IBA
GO:0099131 ATP hydrolysis coupled ion transmembrane transport AnnotationPropagation P GO:0008556 potassium-transporting ATPase activity IBA
GO:0071805 potassium ion transmembrane transport AnnotationPropagation P GO:0008556 potassium-transporting ATPase activity IBA
GO:0099132 ATP hydrolysis coupled cation transmembrane transport AnnotationPropagation P GO:0008556 potassium-transporting ATPase activity IBA
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0008667 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase activity IBA
GO:0005622 intracellular AnnotationPropagation C GO:0000160 phosphorelay signal transduction system IBA
GO:0006855 drug transmembrane transport AnnotationPropagation P GO:0015499 formate transmembrane transporter activity IBA
GO:0015724 formate transport AnnotationPropagation P GO:0015499 formate transmembrane transporter activity IBA
GO:1905039 carboxylic acid transmembrane transport AnnotationPropagation P GO:0015499 formate transmembrane transporter activity IBA
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0015036 disulfide oxidoreductase activity IBA
GO:0035442 dipeptide transmembrane transport AnnotationPropagation P GO:0071916 dipeptide transmembrane transporter activity IBA
GO:0006355 regulation of transcription, DNA-templated AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0016310 phosphorylation AnnotationPropagation P GO:0009029 tetraacyldisaccharide 4'-kinase activity IBA
GO:0000160 phosphorelay signal transduction system AnnotationPropagation P GO:0000156 phosphorelay response regulator activity IBA
GO:0036525 protein deglycation AnnotationPropagation P GO:0036524 protein deglycase activity IBA
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0052890 oxidoreductase activity, acting on the CH-CH group of donors, with a flavin as acceptor IBA
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase IBA
GO:0070588 calcium ion transmembrane transport AnnotationPropagation P GO:0008273 calcium, potassium:sodium antiporter activity IBA
GO:0071805 potassium ion transmembrane transport AnnotationPropagation P GO:0008273 calcium, potassium:sodium antiporter activity IBA
GO:0035725 sodium ion transmembrane transport AnnotationPropagation P GO:0008273 calcium, potassium:sodium antiporter activity IBA
GO:0006096 glycolytic process AnnotationPropagation P GO:0004743 pyruvate kinase activity IBA
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0004029 aldehyde dehydrogenase (NAD) activity IBA
GO:0035442 dipeptide transmembrane transport AnnotationPropagation P GO:0071916 dipeptide transmembrane transporter activity IBA
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0033737 1-pyrroline dehydrogenase activity IBA
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0004152 dihydroorotate dehydrogenase activity IBA
GO:0006412 translation AnnotationPropagation P GO:0003746 translation elongation factor activity IBA
GO:0006414 translational elongation AnnotationPropagation P GO:0003746 translation elongation factor activity IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0015333 peptide:proton symporter activity IBA
GO:0042886 amide transport AnnotationPropagation P GO:0015333 peptide:proton symporter activity IBA
GO:0006468 protein phosphorylation AnnotationPropagation P GO:0004672 protein kinase activity IBA
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0042602 riboflavin reductase (NADPH) activity IBA
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0050311 sulfite reductase (ferredoxin) activity IBA
GO:0016310 phosphorylation AnnotationPropagation P GO:0050515 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity IBA
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0004412 homoserine dehydrogenase activity IBA
GO:0006259 DNA metabolic process AnnotationPropagation P GO:0008855 exodeoxyribonuclease VII activity IBA
GO:0090305 nucleic acid phosphodiester bond hydrolysis AnnotationPropagation P GO:0008855 exodeoxyribonuclease VII activity IBA
GO:0006355 regulation of transcription, DNA-templated AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0031167 rRNA methylation AnnotationPropagation P GO:0070041 rRNA (uridine-C5-)-methyltransferase activity IBA
GO:0022900 electron transport chain AnnotationPropagation P GO:0009055 electron transfer activity IBA
GO:1901998 toxin transport AnnotationPropagation P GO:0019534 toxin transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0019534 toxin transmembrane transporter activity IBA
GO:0006412 translation AnnotationPropagation P GO:0003746 translation elongation factor activity IBA
GO:0006414 translational elongation AnnotationPropagation P GO:0003746 translation elongation factor activity IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA
GO:0034219 carbohydrate transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA
GO:0005623 cell AnnotationPropagation C GO:0045454 cell redox homeostasis IBA
GO:0016310 phosphorylation AnnotationPropagation P GO:0050225 pseudouridine kinase activity IBA
GO:0000160 phosphorelay signal transduction system AnnotationPropagation P GO:0000156 phosphorelay response regulator activity IBA
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0004733 pyridoxamine-phosphate oxidase activity IBA
GO:0042823 pyridoxal phosphate biosynthetic process AnnotationPropagation P GO:0004733 pyridoxamine-phosphate oxidase activity IBA
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0016491 oxidoreductase activity IBA
GO:0022900 electron transport chain AnnotationPropagation P GO:0009055 electron transfer activity IBA
GO:0005623 cell AnnotationPropagation C GO:0009992 cellular water homeostasis IBA
GO:0006355 regulation of transcription, DNA-templated AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0090503 RNA phosphodiester bond hydrolysis, exonucleolytic AnnotationPropagation P GO:0000175 3'-5'-exoribonuclease activity IBA
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0017113 dihydropyrimidine dehydrogenase (NADP+) activity IBA
GO:0016310 phosphorylation AnnotationPropagation P GO:0004072 aspartate kinase activity IBA
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0004458 D-lactate dehydrogenase (cytochrome) activity IBA
GO:0006855 drug transmembrane transport AnnotationPropagation P GO:0015238 drug transmembrane transporter activity IBA
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0016491 oxidoreductase activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IBA
GO:0031167 rRNA methylation AnnotationPropagation P GO:0070042 rRNA (uridine-N3-)-methyltransferase activity IBA
GO:0006355 regulation of transcription, DNA-templated AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0004130 cytochrome-c peroxidase activity IBA
GO:0098869 cellular oxidant detoxification AnnotationPropagation P GO:0004130 cytochrome-c peroxidase activity IBA
GO:0106074 aminoacyl-tRNA metabolism involved in translational fidelity AnnotationPropagation P GO:0002161 aminoacyl-tRNA editing activity IBA
GO:0006508 proteolysis AnnotationPropagation P GO:0004222 metalloendopeptidase activity IBA
GO:0006355 regulation of transcription, DNA-templated AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0006259 DNA metabolic process AnnotationPropagation P GO:0035312 5'-3' exodeoxyribonuclease activity IBA
GO:0090305 nucleic acid phosphodiester bond hydrolysis AnnotationPropagation P GO:0035312 5'-3' exodeoxyribonuclease activity IBA
GO:1903785 L-valine transmembrane transport AnnotationPropagation P GO:0005304 L-valine transmembrane transporter activity IBA
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0004657 proline dehydrogenase activity IBA
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0052873 FMN reductase (NADPH) activity IBA
GO:1903507 negative regulation of nucleic acid-templated transcription AnnotationPropagation P GO:0016989 sigma factor antagonist activity IBA
GO:0005623 cell AnnotationPropagation C GO:0033212 iron assimilation IBA
GO:0006355 regulation of transcription, DNA-templated AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0030488 tRNA methylation AnnotationPropagation P GO:0009019 tRNA (guanine-N1-)-methyltransferase activity IBA
GO:0000160 phosphorelay signal transduction system AnnotationPropagation P GO:0000156 phosphorelay response regulator activity IBA
GO:0006508 proteolysis AnnotationPropagation P GO:0004252 serine-type endopeptidase activity IBA
GO:0006468 protein phosphorylation AnnotationPropagation P GO:0004674 protein serine/threonine kinase activity IBA
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0016491 oxidoreductase activity IBA
GO:0006259 DNA metabolic process AnnotationPropagation P GO:1990238 double-stranded DNA endodeoxyribonuclease activity IBA
GO:0090305 nucleic acid phosphodiester bond hydrolysis AnnotationPropagation P GO:1990238 double-stranded DNA endodeoxyribonuclease activity IBA
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IBA
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0030604 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity IBA
GO:0006508 proteolysis AnnotationPropagation P GO:0004175 endopeptidase activity IBA
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0016491 oxidoreductase activity IBA
GO:0016311 dephosphorylation AnnotationPropagation P GO:0008253 5'-nucleotidase activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015473 fimbrial usher porin activity IBA
GO:0016311 dephosphorylation AnnotationPropagation P GO:0008967 phosphoglycolate phosphatase activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015473 fimbrial usher porin activity IBA
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0008957 phenylacetaldehyde dehydrogenase activity IBA
GO:0090503 RNA phosphodiester bond hydrolysis, exonucleolytic AnnotationPropagation P GO:0000175 3'-5'-exoribonuclease activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0008381 mechanosensitive ion channel activity IBA
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IBA
GO:0031167 rRNA methylation AnnotationPropagation P GO:0009383 rRNA (cytosine-C5-)-methyltransferase activity IBA
GO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic AnnotationPropagation P GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IBA
GO:0034219 carbohydrate transmembrane transport AnnotationPropagation P GO:0090588 protein-phosphocysteine-N-acetylmuramate phosphotransferase system transporter activity IBA
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0003862 3-isopropylmalate dehydrogenase activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015562 efflux transmembrane transporter activity IBA
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0008115 sarcosine oxidase activity IBA
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0008831 dTDP-4-dehydrorhamnose reductase activity IBA
GO:0031564 transcription antitermination AnnotationPropagation P GO:0001072 transcription antitermination factor activity, RNA binding IBA
GO:1904823 purine nucleobase transmembrane transport AnnotationPropagation P GO:0042907 xanthine transmembrane transporter activity IBA
GO:0042906 xanthine transport AnnotationPropagation P GO:0042907 xanthine transmembrane transporter activity IBA
GO:1903874 ferrous iron transmembrane transport AnnotationPropagation P GO:0015093 ferrous iron transmembrane transporter activity IBA
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0004362 glutathione-disulfide reductase activity IBA
GO:0098869 cellular oxidant detoxification AnnotationPropagation P GO:0004362 glutathione-disulfide reductase activity IBA
GO:0035442 dipeptide transmembrane transport AnnotationPropagation P GO:0071916 dipeptide transmembrane transporter activity IBA
GO:0046835 carbohydrate phosphorylation AnnotationPropagation P GO:0008673 2-dehydro-3-deoxygluconokinase activity IBA
GO:0006508 proteolysis AnnotationPropagation P GO:0004176 ATP-dependent peptidase activity IBA
GO:0071806 protein transmembrane transport AnnotationPropagation P GO:0015462 ATPase-coupled protein transmembrane transporter activity IBA
GO:0035442 dipeptide transmembrane transport AnnotationPropagation P GO:0071916 dipeptide transmembrane transporter activity IBA
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0003995 acyl-CoA dehydrogenase activity IBA
GO:0000160 phosphorelay signal transduction system AnnotationPropagation P GO:0000155 phosphorelay sensor kinase activity IBA
GO:0018106 peptidyl-histidine phosphorylation AnnotationPropagation P GO:0000155 phosphorelay sensor kinase activity IBA
GO:0023014 signal transduction by protein phosphorylation AnnotationPropagation P GO:0000155 phosphorelay sensor kinase activity IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0015528 lactose:proton symporter activity IBA
GO:0034219 carbohydrate transmembrane transport AnnotationPropagation P GO:0015528 lactose:proton symporter activity IBA
GO:0015767 lactose transport AnnotationPropagation P GO:0015528 lactose:proton symporter activity IBA
GO:0005623 cell AnnotationPropagation C GO:0045454 cell redox homeostasis IBA
GO:0006508 proteolysis AnnotationPropagation P GO:0004222 metalloendopeptidase activity IBA
GO:0035442 dipeptide transmembrane transport AnnotationPropagation P GO:0071916 dipeptide transmembrane transporter activity IBA
GO:0046835 carbohydrate phosphorylation AnnotationPropagation P GO:0019200 carbohydrate kinase activity IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015658 branched-chain amino acid transmembrane transporter activity IBA
GO:0015803 branched-chain amino acid transport AnnotationPropagation P GO:0015658 branched-chain amino acid transmembrane transporter activity IBA
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0004777 succinate-semialdehyde dehydrogenase (NAD+) activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0015078 proton transmembrane transporter activity IBA
GO:0032259 methylation AnnotationPropagation P GO:0008705 methionine synthase activity IBA
GO:0009086 methionine biosynthetic process AnnotationPropagation P GO:0008705 methionine synthase activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0042959 alkanesulfonate transmembrane transporter activity IBA
GO:0042918 alkanesulfonate transport AnnotationPropagation P GO:0042959 alkanesulfonate transmembrane transporter activity IBA
GO:0046835 carbohydrate phosphorylation AnnotationPropagation P GO:0019200 carbohydrate kinase activity IBA
GO:0006355 regulation of transcription, DNA-templated AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0052693 epoxyqueuosine reductase activity IBA
GO:0071805 potassium ion transmembrane transport AnnotationPropagation P GO:0015079 potassium ion transmembrane transporter activity IBA
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0033737 1-pyrroline dehydrogenase activity IBA
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0008876 quinoprotein glucose dehydrogenase activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0006508 proteolysis AnnotationPropagation P GO:0008798 beta-aspartyl-peptidase activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015473 fimbrial usher porin activity IBA
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0052890 oxidoreductase activity, acting on the CH-CH group of donors, with a flavin as acceptor IBA
GO:0000413 protein peptidyl-prolyl isomerization AnnotationPropagation P GO:0003755 peptidyl-prolyl cis-trans isomerase activity IBA
GO:0006355 regulation of transcription, DNA-templated AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0006310 DNA recombination AnnotationPropagation P GO:0000150 recombinase activity IBA
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0004367 glycerol-3-phosphate dehydrogenase [NAD+] activity IBA
GO:0006355 regulation of transcription, DNA-templated AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0006855 drug transmembrane transport AnnotationPropagation P GO:0015238 drug transmembrane transporter activity IBA
GO:0043085 positive regulation of catalytic activity AnnotationPropagation P GO:0008047 enzyme activator activity IBA
GO:0006508 proteolysis AnnotationPropagation P GO:0004222 metalloendopeptidase activity IBA
GO:2000142 regulation of DNA-templated transcription, initiation AnnotationPropagation P GO:0016987 sigma factor activity IBA
GO:0006269 DNA replication, synthesis of RNA primer AnnotationPropagation P GO:0003896 DNA primase activity IBA
GO:0006259 DNA metabolic process AnnotationPropagation P GO:1990238 double-stranded DNA endodeoxyribonuclease activity IBA
GO:0090305 nucleic acid phosphodiester bond hydrolysis AnnotationPropagation P GO:1990238 double-stranded DNA endodeoxyribonuclease activity IBA
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0008137 NADH dehydrogenase (ubiquinone) activity IBA
GO:0006508 proteolysis AnnotationPropagation P GO:0004175 endopeptidase activity IBA
GO:0045893 positive regulation of transcription, DNA-templated AnnotationPropagation P GO:0001216 bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding IBA
GO:0005623 cell AnnotationPropagation C GO:0009992 cellular water homeostasis IBA
GO:0098655 cation transmembrane transport AnnotationPropagation P GO:0046583 cation efflux transmembrane transporter activity IBA
GO:0018108 peptidyl-tyrosine phosphorylation AnnotationPropagation P GO:0004713 protein tyrosine kinase activity IBA
GO:0016310 phosphorylation AnnotationPropagation P GO:0008972 phosphomethylpyrimidine kinase activity IBA
GO:0006508 proteolysis AnnotationPropagation P GO:0071972 peptidoglycan L,D-transpeptidase activity IBA
GO:0000160 phosphorelay signal transduction system AnnotationPropagation P GO:0000155 phosphorelay sensor kinase activity IBA
GO:0018106 peptidyl-histidine phosphorylation AnnotationPropagation P GO:0000155 phosphorelay sensor kinase activity IBA
GO:0023014 signal transduction by protein phosphorylation AnnotationPropagation P GO:0000155 phosphorelay sensor kinase activity IBA
GO:0000160 phosphorelay signal transduction system AnnotationPropagation P GO:0000155 phosphorelay sensor kinase activity IBA
GO:0018106 peptidyl-histidine phosphorylation AnnotationPropagation P GO:0000155 phosphorelay sensor kinase activity IBA
GO:0023014 signal transduction by protein phosphorylation AnnotationPropagation P GO:0000155 phosphorelay sensor kinase activity IBA
GO:0046835 carbohydrate phosphorylation AnnotationPropagation P GO:0004340 glucokinase activity IBA
GO:0051156 glucose 6-phosphate metabolic process AnnotationPropagation P GO:0004340 glucokinase activity IBA
GO:0099131 ATP hydrolysis coupled ion transmembrane transport AnnotationPropagation P GO:0043682 copper-transporting ATPase activity IBA
GO:0099132 ATP hydrolysis coupled cation transmembrane transport AnnotationPropagation P GO:0043682 copper-transporting ATPase activity IBA
GO:0035434 copper ion transmembrane transport AnnotationPropagation P GO:0043682 copper-transporting ATPase activity IBA
GO:0035442 dipeptide transmembrane transport AnnotationPropagation P GO:0071916 dipeptide transmembrane transporter activity IBA
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0004777 succinate-semialdehyde dehydrogenase (NAD+) activity IBA
GO:0032508 DNA duplex unwinding AnnotationPropagation P GO:0004003 ATP-dependent DNA helicase activity IBA
GO:0022900 electron transport chain AnnotationPropagation P GO:0009055 electron transfer activity IBA
GO:0006479 protein methylation AnnotationPropagation P GO:0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity IBA
GO:0098655 cation transmembrane transport AnnotationPropagation P GO:0008324 cation transmembrane transporter activity IBA
GO:1904823 purine nucleobase transmembrane transport AnnotationPropagation P GO:0005345 purine nucleobase transmembrane transporter activity IBA
GO:0030488 tRNA methylation AnnotationPropagation P GO:0004808 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity IBA
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IBA
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0000907 sulfonate dioxygenase activity IBA
GO:0070476 rRNA (guanine-N7)-methylation AnnotationPropagation P GO:0070043 rRNA (guanine-N7-)-methyltransferase activity IBA
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0008688 3-(3-hydroxyphenyl)propionate hydroxylase activity IBA
GO:0006355 regulation of transcription, DNA-templated AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0015914 phospholipid transport AnnotationPropagation P GO:0005548 phospholipid transporter activity IBA
GO:0035444 nickel cation transmembrane transport AnnotationPropagation P GO:0015099 nickel cation transmembrane transporter activity IBA
GO:0000160 phosphorelay signal transduction system AnnotationPropagation P GO:0000156 phosphorelay response regulator activity IBA
GO:0006355 regulation of transcription, DNA-templated AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0015871 choline transport AnnotationPropagation P GO:0015220 choline transmembrane transporter activity IBA
GO:0072488 ammonium transmembrane transport AnnotationPropagation P GO:0015220 choline transmembrane transporter activity IBA
GO:0015768 maltose transport AnnotationPropagation P GO:0015423 maltose-transporting ATPase activity IBA
GO:0034219 carbohydrate transmembrane transport AnnotationPropagation P GO:0015423 maltose-transporting ATPase activity IBA
GO:0019344 cysteine biosynthetic process AnnotationPropagation P GO:0004124 cysteine synthase activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0005315 inorganic phosphate transmembrane transporter activity IBA
GO:0006508 proteolysis AnnotationPropagation P GO:0004222 metalloendopeptidase activity IBA
GO:0009972 cytidine deamination AnnotationPropagation P GO:0004126 cytidine deaminase activity IBA
GO:0016310 phosphorylation AnnotationPropagation P GO:0009041 uridylate kinase activity IBA
GO:0046940 nucleoside monophosphate phosphorylation AnnotationPropagation P GO:0009041 uridylate kinase activity IBA
GO:0006355 regulation of transcription, DNA-templated AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0006412 translation AnnotationPropagation P GO:0003746 translation elongation factor activity IBA
GO:0006414 translational elongation AnnotationPropagation P GO:0003746 translation elongation factor activity IBA
GO:0022900 electron transport chain AnnotationPropagation P GO:0009055 electron transfer activity IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA
GO:0034219 carbohydrate transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA
GO:0005622 intracellular AnnotationPropagation C GO:0000160 phosphorelay signal transduction system IBA
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0004604 phosphoadenylyl-sulfate reductase (thioredoxin) activity IBA
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0003973 (S)-2-hydroxy-acid oxidase activity IBA
GO:0035429 gluconate transmembrane transport AnnotationPropagation P GO:0015128 gluconate transmembrane transporter activity IBA
GO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic AnnotationPropagation P GO:0004523 RNA-DNA hybrid ribonuclease activity IBA
GO:0030488 tRNA methylation AnnotationPropagation P GO:0089715 tRNA m6t6A37 methyltransferase activity IBA
GO:0015768 maltose transport AnnotationPropagation P GO:0015423 maltose-transporting ATPase activity IBA
GO:0034219 carbohydrate transmembrane transport AnnotationPropagation P GO:0015423 maltose-transporting ATPase activity IBA
GO:0006355 regulation of transcription, DNA-templated AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:1903716 guanine transmembrane transport AnnotationPropagation P GO:0015208 guanine transmembrane transporter activity IBA
GO:0071806 protein transmembrane transport AnnotationPropagation P GO:0008320 protein transmembrane transporter activity IBA
GO:0006355 regulation of transcription, DNA-templated AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0006355 regulation of transcription, DNA-templated AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0006855 drug transmembrane transport AnnotationPropagation P GO:0015238 drug transmembrane transporter activity IBA
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0008866 fructuronate reductase activity IBA
GO:0006266 DNA ligation AnnotationPropagation P GO:0003911 DNA ligase (NAD+) activity IBA
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0042279 nitrite reductase (cytochrome, ammonia-forming) activity IBA
GO:1903401 L-lysine transmembrane transport AnnotationPropagation P GO:0015661 L-lysine efflux transmembrane transporter activity IBA
GO:1990822 basic amino acid transmembrane transport AnnotationPropagation P GO:0015661 L-lysine efflux transmembrane transporter activity IBA

Predictions (experimental)