*GAF Parser Summary*

There are 938 GAF parser warnings.

*GAF summary*

Found 399926 annotations in 399961 lines.

*GAF Validation Summary*
Errors are reported first.

For rule GO_AR:0000001 (http://www.geneontology.org/GO.annotation_qc.shtml#GO_AR:0000001)
 Basic GAF checks, there are 832 violations with type Error.

For rule GO_AR:0000014 (http://www.geneontology.org/GO.annotation_qc.shtml#GO_AR:0000014)
 Valid GO term ID, there are 21 violations with type Error.

For rule GO_AR:0000003 (http://www.geneontology.org/GO.annotation_qc.shtml#GO_AR:0000003)
 Annotations to 'binding ; GO:0005488' and 'protein binding ; GO:0005515' should be made with IPI and an interactor in the 'with' field, there are 124 violations with type Warning.

For rule GO_AR:0000006 (http://www.geneontology.org/GO.annotation_qc.shtml#GO_AR:0000006)
 IEP usage is restricted to terms from the Biological Process ontology, there are 5 violations with type Warning.

For rule GO_AR:0000008 (http://www.geneontology.org/GO.annotation_qc.shtml#GO_AR:0000008)
 No annotations should be made to uninformative high level terms, there are 232 violations with type Warning.

For rule GO_AR:0000014 (http://www.geneontology.org/GO.annotation_qc.shtml#GO_AR:0000014)
 Valid GO term ID, there are 8 violations with type Warning.


*GAF Prediction Summary*

Found 2935 predictions, see prediction file for details.

*Used Ontology Summary*

	go/extensions/go-gaf