GAF summary

Found 13341 annotations in 13357 lines.

GAF Validation Summary Errors are reported first.

For rule GO_AR:0000005 (http://www.geneontology.org/GO.annotation_qc.shtml#GO_AR:0000005) No ISS or ISS-related annotations to 'protein binding ; GO:0005515', there is one violation with type Error.

For rule GO_AR:0000003 (http://www.geneontology.org/GO.annotation_qc.shtml#GO_AR:0000003) Annotations to 'binding ; GO:0005488' and 'protein binding ; GO:0005515' should be made with IPI and an interactor in the 'with' field, there is one violation with type Warning.

GAF Prediction Summary

No inferences or predictions to report.

Used Ontology Summary

go/extensions/go-gaf

Report

SUMMARY

Associations: 13341
Lines in file (incl headers): 13356
Lines skipped: 15

STATISTICS

taxon_sample: []
subject_count: 0
object_sample: []
object_count: 0
reference_count: 0
subject_sample: []
taxon_count: 0

MESSAGES

FATAL: 0
ERROR: 3
WARNING: 0

ERROR

Violates GO Rule: obj:'GO:0005788' "GORULE:0000026: IBA evidence codes should be filtered from main MOD gaf sources" UniProtKB E2QYW0 OS9 GO:0005788 PAINT_REF:15414 IBA PANTHER:PTN000395729 C OS9, endoplasmic reticulum lectin OS9|OS9 protein taxon:9615 20150805 GO_Central UniProtKB:F6XBT7
Violates GO Rule: obj:'GO:0030433' "GORULE:0000026: IBA evidence codes should be filtered from main MOD gaf sources" UniProtKB E2QYW0 OS9 GO:0030433 PAINT_REF:15414 IBA PANTHER:PTN000395729 P OS9, endoplasmic reticulum lectin OS9|OS9 protein taxon:9615 20150805 GO_Central UniProtKB:F6XBT7
Violates GO Rule: obj:'GO:0030970' "GORULE:0000026: IBA evidence codes should be filtered from main MOD gaf sources" UniProtKB E2QYW0 OS9 GO:0030970 PAINT_REF:15414 IBA PANTHER:PTN000395729 P OS9, endoplasmic reticulum lectin OS9|OS9 protein taxon:9615 20150805 GO_Central UniProtKB:F6XBT7

OWLTools check

#Line number RuleID ViolationType Message Line
#------------
#------------
# Validation for #13341 annotations in 13357 lines
#------------
#Line number RuleID ViolationType Message Line
#------------
# GO_AR:0000005 No ISS or ISS-related annotations to 'protein binding ; GO:0005515' Error count: 1
5845 GO_AR:0000005 Error No ISS or ISS-related annotations to 'protein binding ; GO:0005515' UniProtKB F1PI70 B9D2 GO:0005515 GO_REF:0000024 ISS UniProtKB:P01137 F Transforming growth factor beta-1 precursor B9D2|B9D2 protein taxon:9615 20141202 AgBase
#------------
# GO_AR:0000003 Annotations to 'binding ; GO:0005488' and 'protein binding ; GO:0005515' should be made with IPI and an interactor in the 'with' field Warning count: 1
5845 GO_AR:0000003 Warning Annotations to 'binding' (GO:0005488) and 'protein binding' (GO:0005515) should be made with an IPI evidence code and the interactor in the 'with' field UniProtKB F1PI70 B9D2 GO:0005515 GO_REF:0000024 ISS UniProtKB:P01137 F Transforming growth factor beta-1 precursor B9D2|B9D2 protein taxon:9615 20141202 AgBase
#------------

Table of contents

Summary