Table of contents
Summary
GAF summary
Found 6247 annotations in 6252 lines.
GAF Validation Summary
Errors are reported first.
For rule GO_AR:0000014 (http://www.geneontology.org/GO.annotation_qc.shtml#GO_AR:0000014)
Valid GO term ID, there is one violation with type Error.
For rule GO_AR:0000014 (http://www.geneontology.org/GO.annotation_qc.shtml#GO_AR:0000014)
Valid GO term ID, there are 22 violations with type Warning.
GAF Prediction Summary
Found 154 predictions, see prediction file for details.
Used Ontology Summary
go/extensions/go-gaf
Report
SUMMARY
- Associations: 6247
- Lines in file (incl headers): 6275
- Lines skipped: 28
STATISTICS
- subject_count: 0
- object_sample: []
- object_count: 0
- reference_count: 0
- taxon_sample: []
- taxon_count: 0
- subject_sample: []
MESSAGES
- FATAL: 0
- ERROR: 27
- WARNING: 23
ERROR
- Violates GO Rule: obj:'GO:0006810' "GORULE:0000008: No annotations should be made to uninformatively high level terms"
GeneDB LmjF.22.1350.2:mRNA LmjF.22.1350 GO:0006810 GO_REF:0000024 ISO GeneDB:Tb927.7.3350 P palmitoyl acyltransferase 11, putative LmjF22.1350 transcript taxon:347515 20110802 GeneDB
- Violates GO Rule: obj:'GO:0006810' "GORULE:0000008: No annotations should be made to uninformatively high level terms"
GeneDB LmjF.19.0800:mRNA ABCF2 GO:0006810 GO_REF:0000002 ISS P ABC transport system ATP-binding protein, putative LmjF19.0800 transcript taxon:347515 20090731 GeneDB
- Violates GO Rule: obj:'GO:0006810' "GORULE:0000008: No annotations should be made to uninformatively high level terms"
GeneDB LmjF.33.0230:mRNA LmjF.33.0230 GO:0006810 PMID:19240115 ISO GeneDB:Tb927.10.10800 P palmitoyl acyltransferase 2, putative LmjF33.0230 transcript taxon:347515 20110620 GeneDB
- Violates GO Rule: obj:'GO:0006810' "GORULE:0000008: No annotations should be made to uninformatively high level terms"
GeneDB LmjF.25.2280:mRNA LmjF.25.2280 GO:0006810 PMID:19240115 ISO GeneDB:Tb927.3.2400 P palmitoyl acyltransferase 10, putative LmjF25.2280 transcript taxon:347515 20110802 GeneDB
- Violates GO Rule: obj:'GO:0006810' "GORULE:0000008: No annotations should be made to uninformatively high level terms"
GeneDB LmjF.21.1390:mRNA LmjF.21.1390 GO:0006810 PMID:19240115 ISO GeneDB:Tb927.10.690 P palmitoyl acyltransferase 3, putative LmjF21.1390 transcript taxon:347515 20110620 GeneDB
- Violates GO Rule: obj:'GO:0006810' "GORULE:0000008: No annotations should be made to uninformatively high level terms"
GeneDB LmjF.02.0110:mRNA LmjF.02.0110 GO:0006810 GO_REF:0000012 ISA UniProtKB:O43592 P tRNA exportin, putative LmjF02.0110 transcript taxon:347515 20140507 GeneDB
- Violates GO Rule: obj:'GO:0006810' "GORULE:0000008: No annotations should be made to uninformatively high level terms"
GeneDB LmjF.11.1090:mRNA LmjF.11.1090 GO:0006810 PMID:19240115 ISO GeneDB:Tb11.02.4090 P palmitoyl acyltransferase 7, putative LmjF11.1090 transcript taxon:347515 20110817 GeneDB
- Violates GO Rule: obj:'GO:0006810' "GORULE:0000008: No annotations should be made to uninformatively high level terms"
GeneDB LmjF.11.1080:mRNA LmjF.11.1080 GO:0006810 PMID:19240115 ISO GeneDB:Tb11.02.4090 P palmitoyl acyltransferase 7, putative LmjF11.1080 transcript taxon:347515 20110817 GeneDB
- Violates GO Rule: obj:'GO:0006810' "GORULE:0000008: No annotations should be made to uninformatively high level terms"
GeneDB LmjF.09.0640:mRNA LmjF.09.0640 GO:0006810 PMID:19240115 ISO GeneDB:Tb11.01.4490 P palmitoyl acyltransferase 5, putative LmjF09.0640 transcript taxon:347515 20110725 GeneDB
- Violates GO Rule: obj:'GO:0008152' "GORULE:0000008: No annotations should be made to uninformatively high level terms"
GeneDB LmjF.32.1960:mRNA LmjF.32.1960 GO:0008152 GO_REF:0000002 ISS P 1-acyl-sn-glycerol-3-phosphateacyltransferase-like protein, putative LmjF32.1960 transcript taxon:347515 20180531 GeneDB
- Violates GO Rule: obj:'GO:0016049' "GORULE:0000008: No annotations should be made to uninformatively high level terms"
GeneDB LmjF.32.0390:mRNA Rpn8 GO:0016049 GO_REF:0000024 ISO GeneDB:Tb927.10.14530 P 19S proteasome non-atpase subunit 8 LmjF32.0390 transcript taxon:347515 20090731 GeneDB
- Violates GO Rule: obj:'GO:0006810' "GORULE:0000008: No annotations should be made to uninformatively high level terms"
GeneDB LmjF.13.0650:mRNA PAT6 GO:0006810 GO_REF:0000002 ISO GeneDB:Tb11.02.1710 P palmitoyl acyltransferase 6, putative LmjF13.0650 transcript taxon:347515 20110725 GeneDB
- Violates GO Rule: obj:'GO:0043492' "GORULE:0000008: No annotations should be made to uninformatively high level terms"
GeneDB LmjF.03.0160:mRNA ABCF1 GO:0043492 PMID:17030997 ISM F ATP-binding cassette protein subfamily F, member 1, putative LmjF03.0160 transcript taxon:347515 20090608 GeneDB
- Unknown evidence class: obj:'NR' "Expecting a known ECO GAF code, e.g ISS"
GeneDB LmjF.20.0560:mRNA LmjF.20.0560 GO:0005829 GO_REF:0000002 NR C cytidine triphosphate synthase, putative LmjF20.0560 transcript taxon:347515 20100816 GeneDB
- Violates GO Rule: obj:'GO:0016049' "GORULE:0000008: No annotations should be made to uninformatively high level terms"
GeneDB LmjF.25.0960:mRNA TUBG GO:0016049 GO_REF:0000024 ISO GeneDB:Tb927.3.910 P tubulin gamma chain LmjF25.0960 transcript taxon:347515 20141210 GeneDB
- Violates GO Rule: obj:'GO:0006810' "GORULE:0000008: No annotations should be made to uninformatively high level terms"
GeneDB LmjF.28.1890:mRNA LmjF.28.1890 GO:0006810 PMID:19240115 ISO GeneDB:Tb11.01.0810 P palmitoyl acyltransferase 4, putative LmjF28.1890 transcript taxon:347515 20110802 GeneDB
- Violates GO Rule: obj:'GO:0007049' "GORULE:0000008: No annotations should be made to uninformatively high level terms"
GeneDB LmjF.21.1080:mRNA CRK1 GO:0007049 GO_REF:0000002 ISO GeneDB:TcCLB.504181.40 P cdc2-related kinase 1 LmjF21.1080 transcript taxon:347515 20170303 GeneDB
- Violates GO Rule: obj:'GO:0006810' "GORULE:0000008: No annotations should be made to uninformatively high level terms"
GeneDB LmjF.22.1350.1:mRNA LmjF.22.1350 GO:0006810 GO_REF:0000024 ISO GeneDB:Tb927.7.3350 P palmitoyl acyltransferase 11, putative LmjF22.1350 transcript taxon:347515 20110802 GeneDB
- Violates GO Rule: obj:'GO:0006810' "GORULE:0000008: No annotations should be made to uninformatively high level terms"
GeneDB LmjF.23.1420:mRNA LmjF.23.1420 GO:0006810 PMID:19240115 ISO GeneDB:Tb927.8.3400 P palmitoyl acyltransferase 12, putative LmjF23.1420 transcript taxon:347515 20110802 GeneDB
- Violates GO Rule: obj:'GO:0008152' "GORULE:0000008: No annotations should be made to uninformatively high level terms"
GeneDB LmjF.36.0150:mRNA LmjF.36.0150 GO:0008152 GO_REF:0000011 ISM InterPro:IPR001345 P 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatas, putative LmjF36.0150 transcript taxon:347515 20090731 GeneDB
- Unknown evidence class: obj:'NR' "Expecting a known ECO GAF code, e.g ISS"
GeneDB LmjF.03.0080:mRNA GAT GO:0005829 GO_REF:0000002 NR C glycerol-3-phosphate acyl transferase LmjF03.0080 transcript taxon:347515 20100803 GeneDB
- Violates GO Rule: obj:'GO:0006810' "GORULE:0000008: No annotations should be made to uninformatively high level terms"
GeneDB LmjF.21.1400:mRNA LmjF.21.1400 GO:0006810 PMID:19240115 ISO GeneDB:Tb927.10.690 P palmitoyl acyltransferase 3, putative LmjF21.1400 transcript taxon:347515 20110620 GeneDB
- Violates GO Rule: obj:'GO:0016049' "GORULE:0000008: No annotations should be made to uninformatively high level terms"
GeneDB LmjF.34.0650:mRNA RPN11 GO:0016049 GO_REF:0000024 ISO GeneDB:Tb927.10.2980 P proteasome regulatory non-ATPase subunit 11, putative LmjF34.0650 transcript taxon:347515 20090731 GeneDB
- Violates GO Rule: obj:'GO:0006810' "GORULE:0000008: No annotations should be made to uninformatively high level terms"
GeneDB LmjF.25.0530:mRNA ABCT GO:0006810 GO_REF:0000024 ISS Pfam:PF00005 P multidrug resistance protein, mitochondrial, putative LmjF25.0530 transcript taxon:347515 20140507 GeneDB
- Violates GO Rule: obj:'GO:0006810' "GORULE:0000008: No annotations should be made to uninformatively high level terms"
GeneDB LmjF.28.0220:mRNA LmjF.28.0220 GO:0006810 PMID:19240115 ISO GeneDB:Tb11.02.5260 P palmitoyl acyltransferase 9, putative LmjF28.0220 transcript taxon:347515 20110725 GeneDB
- Violates GO Rule: obj:'GO:0006810' "GORULE:0000008: No annotations should be made to uninformatively high level terms"
GeneDB LmjF.04.0520:mRNA LmjF.04.0520 GO:0006810 PMID:19240115 ISS P palmitoyl acyltransferase 1, putative LmjF04.0520 transcript taxon:347515 20180531 GeneDB
- Unknown evidence class: obj:'NR' "Expecting a known ECO GAF code, e.g ISS"
GeneDB LmjF.20.1120:mRNA TOR4 GO:0005829 GO_REF:0000002 NR C phosphatidylinositol 3-kinase, putative LmjF20.1120 transcript taxon:347515 20100817 GeneDB
WARNING
- Obsolete class: obj:'GO:1902361' ""
GeneDB LmjF.01.0335:mRNA MPC1 GO:1902361 GO_REF:0000024 ISO GeneDB:Tb927.9.3780 P Mitochondrial pyruvate carrier 1 LmjF01.0335 transcript taxon:347515 20160725 GeneDB
- Obsolete class: obj:'GO:0043623' ""
GeneDB LmjF.29.1820:mRNA LmjF.29.1820 GO:0043623 GO_REF:0000002 ISO GeneDB:Tb927.3.4380 P Tob55, putative LmjF29.1820 transcript taxon:347515 20090617 GeneDB
- Obsolete class: obj:'GO:0015758' ""
GeneDB LmjF.36.6280:mRNA GT3 GO:0015758 GO_REF:0000002 ISO GeneDB:LmxM.36.6280 P glucose transporter 3 LmjF36.6280 transcript taxon:347515 20131112 GeneDB
- Obsolete class: obj:'GO:0032054' ""
GeneDB LmjF.29.0510:mRNA LmjF.29.0510 GO:0032054 PMID:20460437 ISO GeneDB:LinJ.29.0520 P ADF/Cofilin LmjF29.0510 transcript taxon:347515 20100720 GeneDB
- Obsolete class: obj:'GO:0030529' ""
GeneDB LmjF.32.0020:mRNA LmjF.32.0020 GO:0030529 GO_REF:0000002 ISA UniProtKB:BFR1_YEAST C nuclear segregation protein, putative LmjF32.0020 transcript taxon:347515 20130911 GeneDB
- Obsolete class: obj:'GO:0015784' ""
GeneDB LmjF.34.3120:mRNA LPG2 GO:0015784 PMID:9013638 IMP P lipophosphoglycan biosynthetic protein (lpg2) LmjF34.3120 transcript taxon:347515 20100616 GeneDB
- Obsolete class: obj:'GO:0007067' ""
GeneDB LmjF.26.0200:mRNA LmjF.26.0200 GO:0007067 GO_REF:0000002 ISO GeneDB:Tb927.7.1710 P eukaryotic peptide chain release factor subunit 1, putative LmjF26.0200 transcript taxon:347515 20120725 GeneDB
- Obsolete class: obj:'GO:0030529' ""
GeneDB LmjF.04.1170:mRNA DRBD3 GO:0030529 GO_REF:0000024 ISO GeneDB:Tb927.9.8740 C Double RNA binding domain protein 3 PTB1|LmjF04.1170 transcript taxon:347515 20130822 GeneDB
- Obsolete class: obj:'GO:0015758' ""
GeneDB LmjF.36.6300:mRNA GT1 GO:0015758 GO_REF:0000002 ISO GeneDB:LmxM.36.6300 P glucose transporter 1 LmjF36.6300 transcript taxon:347515 20131112 GeneDB
- Obsolete class: obj:'GO:0043566' ""
GeneDB LmjF.09.1480:mRNA JBP1 GO:0043566 GO_REF:0000024 ISO GeneDB:Tb927.11.13640 F Thymine dioxygenase JBP1 LmjF09.1480 transcript taxon:347515 20160126 GeneDB
- Obsolete class: obj:'GO:1902361' ""
GeneDB LmjF.14.1460:mRNA MPC2 GO:1902361 GO_REF:0000024 ISO GeneDB:Tb927.7.3520 P Mitochondrial pyruvate carrier 2 LmjF14.1460 transcript taxon:347515 20160725 GeneDB
- Obsolete class: obj:'GO:0044822' ""
GeneDB LmjF.35.3540:mRNA PNO1 GO:0044822 GO_REF:0000012 ISA UniProtKB:PNO1_HUMAN F pre-rRNA-processing protein PNO1, putative LmjF35.3540 transcript taxon:347515 20140731 GeneDB
- Obsolete class: obj:'GO:0032054' ""
GeneDB LmjF.35.4280:mRNA SAS6 GO:0032054 GO_REF:0000024 ISO GeneDB:Tb927.9.10550 P Spindle assembly abnormal protein 6 homolog LmjF35.4280|SASS6 transcript taxon:347515 20160726 GeneDB
- Obsolete class: obj:'GO:0040023' ""
GeneDB LmjF.27.1760:mRNA tbccd1 GO:0040023 GO_REF:0000002 ISO GeneDB:Tb927.11.2440 P Tubulin cofactor C domain-containing protein 1, putative LmjF27.1760 transcript taxon:347515 20140414 GeneDB
- Obsolete class: obj:'GO:0030529' ""
GeneDB LmjF.27.0130:mRNA LmjF.27.0130 GO:0030529 PMID:19247446 ISO GeneDB:Tb927.3.720 C WW domain/Zinc finger C-x8-C-x5-C-x3-H type (and similar), putative LmjF27.0130 transcript taxon:347515 20090715 GeneDB
- Obsolete class: obj:'GO:0032054' ""
GeneDB LmjF.29.2210:mRNA LRTP GO:0032054 GO_REF:0000024 ISO GeneDB:Tb927.3.4770 P leucine-rich repeat-containing protein LmjF29.2210 transcript taxon:347515 20141209 GeneDB
- Obsolete class: obj:'GO:0015758' ""
GeneDB LmjF.36.6290:mRNA GT2 GO:0015758 GO_REF:0000002 ISO GeneDB:LmxM.36.6290 P glucose transporter 2 LmjF36.6290 transcript taxon:347515 20131112 GeneDB
- Obsolete class: obj:'GO:0001104' ""
GeneDB LmjF.12.0350:mRNA LmjF.12.0350 GO:0001104 GO_REF:0000002 ISO GeneDB:Tb927.6.850 F CCR4-NOT transcription complex subunit 2, putative LmjF12.0350 transcript taxon:347515 20120319 GeneDB
- Obsolete class: obj:'GO:0007067' ""
GeneDB LmjF.36.1640:mRNA UMSBP GO:0007067 GO_REF:0000024 ISO GeneDB:Tb927.10.6060 P universal minicircle sequence binding protein, putative LmjF36.1640 transcript taxon:347515 20141124 GeneDB
- Obsolete class: obj:'GO:0043234' ""
GeneDB LmjF.08.1170:mRNA MRB3010 GO:0043234 GO_REF:0000024 ISO GeneDB:Tb927.5.3010 C MRB1 complex subunit MRB3010 LmjF08.1170 transcript taxon:347515 20150105 GeneDB
- Obsolete class with no replacement: obj:'GO:0050983' ""
GeneDB LmjF.34.0330:mRNA DHS34 GO:0050983 PMID:19880510 IDA P deoxyhypusine synthase LmjF34.0330 transcript taxon:347515 20101116 GeneDB
- Obsolete class: obj:'GO:0006461' ""
GeneDB LmjF.29.1820:mRNA LmjF.29.1820 GO:0006461 PMID:20659504 ISO GeneDB:Tb927.3.4380 P Tob55, putative LmjF29.1820 transcript taxon:347515 20100805 GeneDB
- Obsolete class: obj:'GO:0007126' ""
GeneDB LmjF.32.0020:mRNA LmjF.32.0020 GO:0007126 GO_REF:0000002 ISA UniProtKB:BFR1_YEAST P nuclear segregation protein, putative LmjF32.0020 transcript taxon:347515 20130911 GeneDB
OWLTools check
#Line number RuleID ViolationType Message Line
#------------
#------------
# Validation for #6247 annotations in 6252 lines
#------------
#Line number RuleID ViolationType Message Line
#------------
# GO_AR:0000014 Valid GO term ID Error count: 1
5984 GO_AR:0000014 Error The id 'GO:0050983' in the annotation is an obsolete class GeneDB LmjF.34.0330:mRNA DHS34 GO:0050983 PMID:19880510 IDA P deoxyhypusine synthase LmjF34.0330 transcript taxon:347515 20101116 GeneDB
#------------
# GO_AR:0000014 Valid GO term ID Warning count: 22
78 GO_AR:0000014 Warning The id 'GO:1902361' in the annotation is an alternate id for: GO:0006850 GeneDB LmjF.01.0335:mRNA MPC1 GO:1902361 GO_REF:0000024 ISO GeneDB:Tb927.9.3780 P Mitochondrial pyruvate carrier 1 LmjF01.0335 transcript taxon:347515 20160725 GeneDB
1019 GO_AR:0000014 Warning The id 'GO:0043623' in the annotation is an alternate id for: GO:0034622 GeneDB LmjF.29.1820:mRNA LmjF.29.1820 GO:0043623 GO_REF:0000002 ISO GeneDB:Tb927.3.4380 P Tob55, putative LmjF29.1820 transcript taxon:347515 20090617 GeneDB
1091 GO_AR:0000014 Warning The id 'GO:0015758' in the annotation is an alternate id for: GO:1904659 GeneDB LmjF.36.6280:mRNA GT3 GO:0015758 GO_REF:0000002 ISO GeneDB:LmxM.36.6280 P glucose transporter 3 LmjF36.6280 transcript taxon:347515 20131112 GeneDB
1166 GO_AR:0000014 Warning The id 'GO:0032054' in the annotation is an alternate id for: GO:0007099 GeneDB LmjF.29.0510:mRNA LmjF.29.0510 GO:0032054 PMID:20460437 ISO GeneDB:LinJ.29.0520 P ADF/Cofilin LmjF29.0510 transcript taxon:347515 20100720 GeneDB
1681 GO_AR:0000014 Warning The id 'GO:0030529' in the annotation is an alternate id for: GO:1990904 GeneDB LmjF.32.0020:mRNA LmjF.32.0020 GO:0030529 GO_REF:0000002 ISA UniProtKB:BFR1_YEAST C nuclear segregation protein, putative LmjF32.0020 transcript taxon:347515 20130911 GeneDB
1697 GO_AR:0000014 Warning The id 'GO:0015784' in the annotation is an alternate id for: GO:1990570 GeneDB LmjF.34.3120:mRNA LPG2 GO:0015784 PMID:9013638 IMP P lipophosphoglycan biosynthetic protein (lpg2) LmjF34.3120 transcript taxon:347515 20100616 GeneDB
1737 GO_AR:0000014 Warning The id 'GO:0007067' in the annotation is an alternate id for: GO:0000278 GeneDB LmjF.26.0200:mRNA LmjF.26.0200 GO:0007067 GO_REF:0000002 ISO GeneDB:Tb927.7.1710 P eukaryotic peptide chain release factor subunit 1, putative LmjF26.0200 transcript taxon:347515 20120725 GeneDB
1967 GO_AR:0000014 Warning The id 'GO:0030529' in the annotation is an alternate id for: GO:1990904 GeneDB LmjF.04.1170:mRNA DRBD3 GO:0030529 GO_REF:0000024 ISO GeneDB:Tb927.9.8740 C Double RNA binding domain protein 3 PTB1|LmjF04.1170 transcript taxon:347515 20130822 GeneDB
2159 GO_AR:0000014 Warning The id 'GO:0015758' in the annotation is an alternate id for: GO:1904659 GeneDB LmjF.36.6300:mRNA GT1 GO:0015758 GO_REF:0000002 ISO GeneDB:LmxM.36.6300 P glucose transporter 1 LmjF36.6300 transcript taxon:347515 20131112 GeneDB
2327 GO_AR:0000014 Warning The id 'GO:0043566' in the annotation is an alternate id for: GO:0003677 GeneDB LmjF.09.1480:mRNA JBP1 GO:0043566 GO_REF:0000024 ISO GeneDB:Tb927.11.13640 F Thymine dioxygenase JBP1 LmjF09.1480 transcript taxon:347515 20160126 GeneDB
2635 GO_AR:0000014 Warning The id 'GO:1902361' in the annotation is an alternate id for: GO:0006850 GeneDB LmjF.14.1460:mRNA MPC2 GO:1902361 GO_REF:0000024 ISO GeneDB:Tb927.7.3520 P Mitochondrial pyruvate carrier 2 LmjF14.1460 transcript taxon:347515 20160725 GeneDB
3453 GO_AR:0000014 Warning The id 'GO:0044822' in the annotation is an alternate id for: GO:0003723 GeneDB LmjF.35.3540:mRNA PNO1 GO:0044822 GO_REF:0000012 ISA UniProtKB:PNO1_HUMAN F pre-rRNA-processing protein PNO1, putative LmjF35.3540 transcript taxon:347515 20140731 GeneDB
3551 GO_AR:0000014 Warning The id 'GO:0032054' in the annotation is an alternate id for: GO:0007099 GeneDB LmjF.35.4280:mRNA SAS6 GO:0032054 GO_REF:0000024 ISO GeneDB:Tb927.9.10550 P Spindle assembly abnormal protein 6 homolog LmjF35.4280|SASS6 transcript taxon:347515 20160726 GeneDB
4372 GO_AR:0000014 Warning The id 'GO:0040023' in the annotation is an alternate id for: GO:0007097 GeneDB LmjF.27.1760:mRNA tbccd1 GO:0040023 GO_REF:0000002 ISO GeneDB:Tb927.11.2440 P Tubulin cofactor C domain-containing protein 1, putative LmjF27.1760 transcript taxon:347515 20140414 GeneDB
4655 GO_AR:0000014 Warning The id 'GO:0030529' in the annotation is an alternate id for: GO:1990904 GeneDB LmjF.27.0130:mRNA LmjF.27.0130 GO:0030529 PMID:19247446 ISO GeneDB:Tb927.3.720 C WW domain/Zinc finger C-x8-C-x5-C-x3-H type (and similar), putative LmjF27.0130 transcript taxon:347515 20090715 GeneDB
5039 GO_AR:0000014 Warning The id 'GO:0032054' in the annotation is an alternate id for: GO:0007099 GeneDB LmjF.29.2210:mRNA LRTP GO:0032054 GO_REF:0000024 ISO GeneDB:Tb927.3.4770 P leucine-rich repeat-containing protein LmjF29.2210 transcript taxon:347515 20141209 GeneDB
5404 GO_AR:0000014 Warning The id 'GO:0015758' in the annotation is an alternate id for: GO:1904659 GeneDB LmjF.36.6290:mRNA GT2 GO:0015758 GO_REF:0000002 ISO GeneDB:LmxM.36.6290 P glucose transporter 2 LmjF36.6290 transcript taxon:347515 20131112 GeneDB
5584 GO_AR:0000014 Warning The id 'GO:0001104' in the annotation is an alternate id for: GO:0003712 GeneDB LmjF.12.0350:mRNA LmjF.12.0350 GO:0001104 GO_REF:0000002 ISO GeneDB:Tb927.6.850 F CCR4-NOT transcription complex subunit 2, putative LmjF12.0350 transcript taxon:347515 20120319 GeneDB
5670 GO_AR:0000014 Warning The id 'GO:0007067' in the annotation is an alternate id for: GO:0000278 GeneDB LmjF.36.1640:mRNA UMSBP GO:0007067 GO_REF:0000024 ISO GeneDB:Tb927.10.6060 P universal minicircle sequence binding protein, putative LmjF36.1640 transcript taxon:347515 20141124 GeneDB
5870 GO_AR:0000014 Warning The id 'GO:0043234' in the annotation is an alternate id for: GO:0032991 GeneDB LmjF.08.1170:mRNA MRB3010 GO:0043234 GO_REF:0000024 ISO GeneDB:Tb927.5.3010 C MRB1 complex subunit MRB3010 LmjF08.1170 transcript taxon:347515 20150105 GeneDB
5988 GO_AR:0000014 Warning The id 'GO:0006461' in the annotation is an alternate id for: GO:0065003 GeneDB LmjF.29.1820:mRNA LmjF.29.1820 GO:0006461 PMID:20659504 ISO GeneDB:Tb927.3.4380 P Tob55, putative LmjF29.1820 transcript taxon:347515 20100805 GeneDB
6207 GO_AR:0000014 Warning The id 'GO:0007126' in the annotation is an alternate id for: GO:0051321 GeneDB LmjF.32.0020:mRNA LmjF.32.0020 GO:0007126 GO_REF:0000002 ISA UniProtKB:BFR1_YEAST P nuclear segregation protein, putative LmjF32.0020 transcript taxon:347515 20130911 GeneDB
#------------
Predictions
GO:0005622 intracellular AnnotationPropagation C GO:0035735 intraciliary transport involved in cilium assembly ISO
GO:0005623 cell AnnotationPropagation C GO:0035735 intraciliary transport involved in cilium assembly ISO
GO:0005929 cilium AnnotationPropagation C GO:0035735 intraciliary transport involved in cilium assembly ISO
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0004155 6,7-dihydropteridine reductase activity IDA
GO:0005739 mitochondrion AnnotationPropagation C GO:0034551 mitochondrial respiratory chain complex III assembly ISO
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0004029 aldehyde dehydrogenase (NAD) activity ISO
GO:0006468 protein phosphorylation AnnotationPropagation P GO:0004674 protein serine/threonine kinase activity ISM
GO:0046854 phosphatidylinositol phosphorylation AnnotationPropagation P GO:0016307 phosphatidylinositol phosphate kinase activity ISO
GO:0055085 transmembrane transport AnnotationPropagation P GO:0042626 ATPase activity, coupled to transmembrane movement of substances ISM
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0004657 proline dehydrogenase activity ISM
GO:0055085 transmembrane transport AnnotationPropagation P GO:0042626 ATPase activity, coupled to transmembrane movement of substances ISM
GO:0072334 UDP-galactose transmembrane transport AnnotationPropagation P GO:0005459 UDP-galactose transmembrane transporter activity IGI
GO:0005622 intracellular AnnotationPropagation C GO:0006406 mRNA export from nucleus ISO
GO:0005623 cell AnnotationPropagation C GO:0006406 mRNA export from nucleus ISO
GO:0005622 intracellular AnnotationPropagation C GO:0035735 intraciliary transport involved in cilium assembly ISO
GO:0005623 cell AnnotationPropagation C GO:0035735 intraciliary transport involved in cilium assembly ISO
GO:0005929 cilium AnnotationPropagation C GO:0035735 intraciliary transport involved in cilium assembly ISO
GO:0035246 peptidyl-arginine N-methylation AnnotationPropagation P GO:0016274 protein-arginine N-methyltransferase activity IMP
GO:0006355 regulation of transcription, DNA-templated AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity ISM
GO:0090305 nucleic acid phosphodiester bond hydrolysis AnnotationPropagation P GO:0004527 exonuclease activity ISM
GO:0006508 proteolysis AnnotationPropagation P GO:0004222 metalloendopeptidase activity ISO
GO:0055085 transmembrane transport AnnotationPropagation P GO:0042626 ATPase activity, coupled to transmembrane movement of substances ISM
GO:0035435 phosphate ion transmembrane transport AnnotationPropagation P GO:0015321 sodium-dependent phosphate transmembrane transporter activity ISO
GO:0044341 sodium-dependent phosphate transport AnnotationPropagation P GO:0015321 sodium-dependent phosphate transmembrane transporter activity ISO
GO:0006259 DNA metabolic process AnnotationPropagation P GO:0004529 exodeoxyribonuclease activity ISM
GO:0090305 nucleic acid phosphodiester bond hydrolysis AnnotationPropagation P GO:0004529 exodeoxyribonuclease activity ISM
GO:0006468 protein phosphorylation AnnotationPropagation P GO:0004674 protein serine/threonine kinase activity ISS
GO:0000413 protein peptidyl-prolyl isomerization AnnotationPropagation P GO:0003755 peptidyl-prolyl cis-trans isomerase activity ISO
GO:0005622 intracellular AnnotationPropagation C GO:0006406 mRNA export from nucleus ISO
GO:0005623 cell AnnotationPropagation C GO:0006406 mRNA export from nucleus ISO
GO:0005622 intracellular AnnotationPropagation C GO:0035720 intraciliary anterograde transport ISO
GO:0005623 cell AnnotationPropagation C GO:0035720 intraciliary anterograde transport ISO
GO:0005929 cilium AnnotationPropagation C GO:0035720 intraciliary anterograde transport ISO
GO:0016310 phosphorylation AnnotationPropagation P GO:0051736 ATP-dependent polyribonucleotide 5'-hydroxyl-kinase activity ISA
GO:0016311 dephosphorylation AnnotationPropagation P GO:0008254 3'-nucleotidase activity ISO
GO:0005622 intracellular AnnotationPropagation C GO:0006626 protein targeting to mitochondrion ISO
GO:0005623 cell AnnotationPropagation C GO:0006626 protein targeting to mitochondrion ISO
GO:1904659 glucose transmembrane transport AnnotationPropagation P GO:0055056 D-glucose transmembrane transporter activity ISO
GO:0032774 RNA biosynthetic process AnnotationPropagation P GO:0003899 DNA-directed 5'-3' RNA polymerase activity ISM
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0016491 oxidoreductase activity ISO
GO:0055085 transmembrane transport AnnotationPropagation P GO:0042626 ATPase activity, coupled to transmembrane movement of substances ISM
GO:0006508 proteolysis AnnotationPropagation P GO:0016920 pyroglutamyl-peptidase activity IDA
GO:0006508 proteolysis AnnotationPropagation P GO:0070012 oligopeptidase activity ISO
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0004352 glutamate dehydrogenase (NAD+) activity IDA
GO:0005623 cell AnnotationPropagation C GO:0006874 cellular calcium ion homeostasis ISO
GO:0005622 intracellular AnnotationPropagation C GO:0006626 protein targeting to mitochondrion ISO
GO:0005623 cell AnnotationPropagation C GO:0006626 protein targeting to mitochondrion ISO
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0016972 thiol oxidase activity ISO
GO:0050790 regulation of catalytic activity AnnotationPropagation P GO:0043763 UTP:glucose-1-phosphate uridylyltransferase regulator activity IDA
GO:0005622 intracellular AnnotationPropagation C GO:0030150 protein import into mitochondrial matrix ISO
GO:0005623 cell AnnotationPropagation C GO:0030150 protein import into mitochondrial matrix ISO
GO:0071806 protein transmembrane transport AnnotationPropagation P GO:0008320 protein transmembrane transporter activity ISA
GO:0006508 proteolysis AnnotationPropagation P GO:0004198 calcium-dependent cysteine-type endopeptidase activity ISM
GO:0055085 transmembrane transport AnnotationPropagation P GO:0042626 ATPase activity, coupled to transmembrane movement of substances ISM
GO:0090305 nucleic acid phosphodiester bond hydrolysis AnnotationPropagation P GO:0004519 endonuclease activity ISO
GO:0006508 proteolysis AnnotationPropagation P GO:0004181 metallocarboxypeptidase activity ISO
GO:0015798 myo-inositol transport AnnotationPropagation P GO:0005365 myo-inositol transmembrane transporter activity IDA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0005365 myo-inositol transmembrane transporter activity IDA
GO:0022900 electron transport chain AnnotationPropagation P GO:0004129 cytochrome-c oxidase activity ISO
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0004129 cytochrome-c oxidase activity ISO
GO:0005622 intracellular AnnotationPropagation C GO:0035721 intraciliary retrograde transport ISO
GO:0005623 cell AnnotationPropagation C GO:0035721 intraciliary retrograde transport ISO
GO:0005929 cilium AnnotationPropagation C GO:0035721 intraciliary retrograde transport ISO
GO:0005622 intracellular AnnotationPropagation C GO:0035735 intraciliary transport involved in cilium assembly ISO
GO:0005623 cell AnnotationPropagation C GO:0035735 intraciliary transport involved in cilium assembly ISO
GO:0005929 cilium AnnotationPropagation C GO:0035735 intraciliary transport involved in cilium assembly ISO
GO:0005622 intracellular AnnotationPropagation C GO:0035720 intraciliary anterograde transport ISO
GO:0005623 cell AnnotationPropagation C GO:0035720 intraciliary anterograde transport ISO
GO:0005929 cilium AnnotationPropagation C GO:0035720 intraciliary anterograde transport ISO
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0030611 arsenate reductase activity IDA
GO:0006508 proteolysis AnnotationPropagation P GO:0004197 cysteine-type endopeptidase activity ISM
GO:0035335 peptidyl-tyrosine dephosphorylation AnnotationPropagation P GO:0004725 protein tyrosine phosphatase activity IDA
GO:0000413 protein peptidyl-prolyl isomerization AnnotationPropagation P GO:0003755 peptidyl-prolyl cis-trans isomerase activity ISO
GO:0016310 phosphorylation AnnotationPropagation P GO:0008887 glycerate kinase activity RCA
GO:0016311 dephosphorylation AnnotationPropagation P GO:0042132 fructose 1,6-bisphosphate 1-phosphatase activity IDA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0015506 nucleoside:proton symporter activity ISO
GO:1901642 nucleoside transmembrane transport AnnotationPropagation P GO:0015506 nucleoside:proton symporter activity ISO
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0003885 D-arabinono-1,4-lactone oxidase activity ISO
GO:0022900 electron transport chain AnnotationPropagation P GO:0008121 ubiquinol-cytochrome-c reductase activity ISS
GO:0055085 transmembrane transport AnnotationPropagation P GO:0042626 ATPase activity, coupled to transmembrane movement of substances ISM
GO:0005622 intracellular AnnotationPropagation C GO:0035735 intraciliary transport involved in cilium assembly ISO
GO:0005623 cell AnnotationPropagation C GO:0035735 intraciliary transport involved in cilium assembly ISO
GO:0005929 cilium AnnotationPropagation C GO:0035735 intraciliary transport involved in cilium assembly ISO
GO:0097502 mannosylation AnnotationPropagation P GO:0000026 alpha-1,2-mannosyltransferase activity ISO
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0051920 peroxiredoxin activity IDA
GO:0098869 cellular oxidant detoxification AnnotationPropagation P GO:0051920 peroxiredoxin activity IDA
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0045174 glutathione dehydrogenase (ascorbate) activity IDA
GO:0098869 cellular oxidant detoxification AnnotationPropagation P GO:0045174 glutathione dehydrogenase (ascorbate) activity IDA
GO:0005623 cell AnnotationPropagation C GO:0045454 cell redox homeostasis ISO
GO:0016311 dephosphorylation AnnotationPropagation P GO:0042577 lipid phosphatase activity IDA
GO:0005623 cell AnnotationPropagation C GO:0045454 cell redox homeostasis ISO
GO:0097502 mannosylation AnnotationPropagation P GO:0000026 alpha-1,2-mannosyltransferase activity ISO
GO:0006468 protein phosphorylation AnnotationPropagation P GO:0004672 protein kinase activity ISO
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0008137 NADH dehydrogenase (ubiquinone) activity ISS
GO:0055085 transmembrane transport AnnotationPropagation P GO:0042626 ATPase activity, coupled to transmembrane movement of substances ISM
GO:0006657 CDP-choline pathway AnnotationPropagation P GO:0004142 diacylglycerol cholinephosphotransferase activity ISO
GO:0032259 methylation AnnotationPropagation P GO:0016273 arginine N-methyltransferase activity ISO
GO:0097502 mannosylation AnnotationPropagation P GO:0000009 alpha-1,6-mannosyltransferase activity ISO
GO:0006508 proteolysis AnnotationPropagation P GO:0070012 oligopeptidase activity IMP
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0051920 peroxiredoxin activity IDA
GO:0098869 cellular oxidant detoxification AnnotationPropagation P GO:0051920 peroxiredoxin activity IDA
GO:0032774 RNA biosynthetic process AnnotationPropagation P GO:0003899 DNA-directed 5'-3' RNA polymerase activity ISO
GO:0097502 mannosylation AnnotationPropagation P GO:0000026 alpha-1,2-mannosyltransferase activity ISO
GO:0006508 proteolysis AnnotationPropagation P GO:0008234 cysteine-type peptidase activity EXP
GO:0005739 mitochondrion AnnotationPropagation C GO:0006390 mitochondrial transcription ISO
GO:0016567 protein ubiquitination AnnotationPropagation P GO:0004842 ubiquitin-protein transferase activity ISA
GO:1901642 nucleoside transmembrane transport AnnotationPropagation P GO:0005337 nucleoside transmembrane transporter activity ISO
GO:0006508 proteolysis AnnotationPropagation P GO:0008234 cysteine-type peptidase activity EXP
GO:0032774 RNA biosynthetic process AnnotationPropagation P GO:0003899 DNA-directed 5'-3' RNA polymerase activity ISO
GO:1903508 positive regulation of nucleic acid-templated transcription AnnotationPropagation P GO:0003713 transcription coactivator activity ISS
GO:0006470 protein dephosphorylation AnnotationPropagation P GO:0004721 phosphoprotein phosphatase activity ISA
GO:0005622 intracellular AnnotationPropagation C GO:0035735 intraciliary transport involved in cilium assembly ISO
GO:0005623 cell AnnotationPropagation C GO:0035735 intraciliary transport involved in cilium assembly ISO
GO:0005929 cilium AnnotationPropagation C GO:0035735 intraciliary transport involved in cilium assembly ISO
GO:0016310 phosphorylation AnnotationPropagation P GO:0050201 fucokinase activity IMP
GO:0097502 mannosylation AnnotationPropagation P GO:0004584 dolichyl-phosphate-mannose-glycolipid alpha-mannosyltransferase activity ISO
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0008398 sterol 14-demethylase activity ISO
GO:0070988 demethylation AnnotationPropagation P GO:0008398 sterol 14-demethylase activity ISO
GO:0015755 fructose transmembrane transport AnnotationPropagation P GO:0005353 fructose transmembrane transporter activity ISO
GO:0055085 transmembrane transport AnnotationPropagation P GO:0042626 ATPase activity, coupled to transmembrane movement of substances ISM
GO:0005622 intracellular AnnotationPropagation C GO:0007264 small GTPase mediated signal transduction ISM
GO:0032774 RNA biosynthetic process AnnotationPropagation P GO:0003899 DNA-directed 5'-3' RNA polymerase activity ISO
GO:0070588 calcium ion transmembrane transport AnnotationPropagation P GO:0015085 calcium ion transmembrane transporter activity ISO
GO:0046854 phosphatidylinositol phosphorylation AnnotationPropagation P GO:0016303 1-phosphatidylinositol-3-kinase activity ISO
GO:0036092 phosphatidylinositol-3-phosphate biosynthetic process AnnotationPropagation P GO:0016303 1-phosphatidylinositol-3-kinase activity ISO
GO:0005622 intracellular AnnotationPropagation C GO:0035721 intraciliary retrograde transport ISO
GO:0005623 cell AnnotationPropagation C GO:0035721 intraciliary retrograde transport ISO
GO:0005929 cilium AnnotationPropagation C GO:0035721 intraciliary retrograde transport ISO
GO:0015761 mannose transmembrane transport AnnotationPropagation P GO:0015578 mannose transmembrane transporter activity ISO
GO:0034968 histone lysine methylation AnnotationPropagation P GO:0018024 histone-lysine N-methyltransferase activity ISO
GO:0005622 intracellular AnnotationPropagation C GO:0035735 intraciliary transport involved in cilium assembly ISO
GO:0005623 cell AnnotationPropagation C GO:0035735 intraciliary transport involved in cilium assembly ISO
GO:0005929 cilium AnnotationPropagation C GO:0035735 intraciliary transport involved in cilium assembly ISO
GO:0005622 intracellular AnnotationPropagation C GO:0038203 TORC2 signaling ISO
GO:0006468 protein phosphorylation AnnotationPropagation P GO:0004674 protein serine/threonine kinase activity ISM
GO:0006508 proteolysis AnnotationPropagation P GO:0008241 peptidyl-dipeptidase activity ISO
GO:0006096 glycolytic process AnnotationPropagation P GO:0004743 pyruvate kinase activity RCA
GO:0019722 calcium-mediated signaling AnnotationPropagation P GO:0005220 inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity ISO
GO:0051209 release of sequestered calcium ion into cytosol AnnotationPropagation P GO:0005220 inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity ISO
GO:0048016 inositol phosphate-mediated signaling AnnotationPropagation P GO:0005220 inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity ISO
GO:0005622 intracellular AnnotationPropagation C GO:0006406 mRNA export from nucleus ISO
GO:0005623 cell AnnotationPropagation C GO:0006406 mRNA export from nucleus ISO
GO:0090305 nucleic acid phosphodiester bond hydrolysis AnnotationPropagation P GO:0004527 exonuclease activity ISM
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015205 nucleobase transmembrane transporter activity IDA
GO:0015851 nucleobase transport AnnotationPropagation P GO:0015205 nucleobase transmembrane transporter activity IDA
GO:1903830 magnesium ion transmembrane transport AnnotationPropagation P GO:0015095 magnesium ion transmembrane transporter activity EXP
GO:0032508 DNA duplex unwinding AnnotationPropagation P GO:0004003 ATP-dependent DNA helicase activity ISO
GO:0005622 intracellular AnnotationPropagation C GO:0035735 intraciliary transport involved in cilium assembly ISO
GO:0005623 cell AnnotationPropagation C GO:0035735 intraciliary transport involved in cilium assembly ISO
GO:0005929 cilium AnnotationPropagation C GO:0035735 intraciliary transport involved in cilium assembly ISO
GO:0016310 phosphorylation AnnotationPropagation P GO:0004305 ethanolamine kinase activity IDA
GO:0016310 phosphorylation AnnotationPropagation P GO:0016301 kinase activity ISO
GO:0005623 cell AnnotationPropagation C GO:0006882 cellular zinc ion homeostasis ISO
GO:0055085 transmembrane transport AnnotationPropagation P GO:0042626 ATPase activity, coupled to transmembrane movement of substances ISM
Predictions (experimental)
N/A