GO:0015031	protein transport	AnnotationPropagation	P	GO:0008565	protein transporter activity	IMP
GO:0005622	intracellular	AnnotationPropagation	C	GO:0065002	intracellular protein transmembrane transport	IDA
GO:0005623	cell	AnnotationPropagation	C	GO:0065002	intracellular protein transmembrane transport	IDA
GO:0006468	protein phosphorylation	AnnotationPropagation	P	GO:0008772	[isocitrate dehydrogenase (NADP+)] kinase activity	IDA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0004764	shikimate 3-dehydrogenase (NADP+) activity	IDA
GO:0006259	DNA metabolic process	AnnotationPropagation	P	GO:0008821	crossover junction endodeoxyribonuclease activity	IMP
GO:0090305	nucleic acid phosphodiester bond hydrolysis	AnnotationPropagation	P	GO:0008821	crossover junction endodeoxyribonuclease activity	IMP
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0015473	fimbrial usher porin activity	ISS
GO:0007165	signal transduction	AnnotationPropagation	P	GO:0004871	signal transducer activity	IMP
GO:0090116	C-5 methylation of cytosine	AnnotationPropagation	P	GO:0003886	DNA (cytosine-5-)-methyltransferase activity	IDA
GO:0010951	negative regulation of endopeptidase activity	AnnotationPropagation	P	GO:0004866	endopeptidase inhibitor activity	IDA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0004022	alcohol dehydrogenase (NAD) activity	IDA
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0015453	oxidoreduction-driven active transmembrane transporter activity	IDA
GO:0006355	regulation of transcription, DNA-templated	AnnotationPropagation	P	GO:0003700	DNA binding transcription factor activity	IMP
GO:0046836	glycolipid transport	AnnotationPropagation	P	GO:0017089	glycolipid transporter activity	IMP
GO:0030488	tRNA methylation	AnnotationPropagation	P	GO:0004808	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity	IDA
GO:0099131	ATP hydrolysis coupled ion transmembrane transport	AnnotationPropagation	P	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism	IDA
GO:1902600	proton transmembrane transport	AnnotationPropagation	P	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism	IDA
GO:0099132	ATP hydrolysis coupled cation transmembrane transport	AnnotationPropagation	P	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism	IDA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IDA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0015035	protein disulfide oxidoreductase activity	IDA
GO:0022900	electron transport chain	AnnotationPropagation	P	GO:0009055	electron transfer activity	ISM
GO:0000160	phosphorelay signal transduction system	AnnotationPropagation	P	GO:0000155	phosphorelay sensor kinase activity	IDA
GO:0018106	peptidyl-histidine phosphorylation	AnnotationPropagation	P	GO:0000155	phosphorelay sensor kinase activity	IDA
GO:0023014	signal transduction by protein phosphorylation	AnnotationPropagation	P	GO:0000155	phosphorelay sensor kinase activity	IDA
GO:0006355	regulation of transcription, DNA-templated	AnnotationPropagation	P	GO:0003700	DNA binding transcription factor activity	IDA
GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic	AnnotationPropagation	P	GO:0004521	endoribonuclease activity	IDA
GO:0016310	phosphorylation	AnnotationPropagation	P	GO:0003951	NAD+ kinase activity	IDA
GO:0006508	proteolysis	AnnotationPropagation	P	GO:0008233	peptidase activity	IGI
GO:0006259	DNA metabolic process	AnnotationPropagation	P	GO:0008853	exodeoxyribonuclease III activity	IDA
GO:0090305	nucleic acid phosphodiester bond hydrolysis	AnnotationPropagation	P	GO:0008853	exodeoxyribonuclease III activity	IDA
GO:0046939	nucleotide phosphorylation	AnnotationPropagation	P	GO:0004798	thymidylate kinase activity	IDA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0033797	selenate reductase activity	IMP
GO:0006355	regulation of transcription, DNA-templated	AnnotationPropagation	P	GO:0003700	DNA binding transcription factor activity	IDA
GO:0005622	intracellular	AnnotationPropagation	C	GO:0000160	phosphorelay signal transduction system	RCA
GO:0006508	proteolysis	AnnotationPropagation	P	GO:0004298	threonine-type endopeptidase activity	IMP
GO:0006508	proteolysis	AnnotationPropagation	P	GO:0008233	peptidase activity	IDA
GO:0032508	DNA duplex unwinding	AnnotationPropagation	P	GO:0003678	DNA helicase activity	IDA
GO:0032781	positive regulation of ATPase activity	AnnotationPropagation	P	GO:0001671	ATPase activator activity	IDA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0000908	taurine dioxygenase activity	IDA
GO:0005622	intracellular	AnnotationPropagation	C	GO:0065002	intracellular protein transmembrane transport	IMP
GO:0005623	cell	AnnotationPropagation	C	GO:0065002	intracellular protein transmembrane transport	IMP
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0004368	glycerol-3-phosphate dehydrogenase activity	IDA
GO:2000142	regulation of DNA-templated transcription, initiation	AnnotationPropagation	P	GO:0016987	bacterial sigma factor activity	IDA
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0015292	uniporter activity	ISS
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0003920	GMP reductase activity	IDA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IDA
GO:0090501	RNA phosphodiester bond hydrolysis	AnnotationPropagation	P	GO:0004540	ribonuclease activity	IMP
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0009010	sorbitol-6-phosphate 2-dehydrogenase activity	IDA
GO:0017148	negative regulation of translation	AnnotationPropagation	P	GO:0000900	translation repressor activity, mRNA regulatory element binding	IMP
GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic	AnnotationPropagation	P	GO:0004523	RNA-DNA hybrid ribonuclease activity	IDA
GO:0006355	regulation of transcription, DNA-templated	AnnotationPropagation	P	GO:0003700	DNA binding transcription factor activity	IDA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0008794	arsenate reductase (glutaredoxin) activity	ISS
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0004322	ferroxidase activity	IDA
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0005315	inorganic phosphate transmembrane transporter activity	IMP
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0003960	NADPH:quinone reductase activity	ISS
GO:0005623	cell	AnnotationPropagation	C	GO:0051454	intracellular pH elevation	IMP
GO:0006355	regulation of transcription, DNA-templated	AnnotationPropagation	P	GO:0003700	DNA binding transcription factor activity	ISS
GO:0000160	phosphorelay signal transduction system	AnnotationPropagation	P	GO:0000156	phosphorelay response regulator activity	IDA
GO:0006508	proteolysis	AnnotationPropagation	P	GO:0004177	aminopeptidase activity	IDA
GO:0006355	regulation of transcription, DNA-templated	AnnotationPropagation	P	GO:0003700	DNA binding transcription factor activity	IDA
GO:1904823	purine nucleobase transmembrane transport	AnnotationPropagation	P	GO:0042907	xanthine transmembrane transporter activity	IDA
GO:0042906	xanthine transport	AnnotationPropagation	P	GO:0042907	xanthine transmembrane transporter activity	IDA
GO:0006355	regulation of transcription, DNA-templated	AnnotationPropagation	P	GO:0003700	DNA binding transcription factor activity	IDA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0046429	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity	IDA
GO:0099131	ATP hydrolysis coupled ion transmembrane transport	AnnotationPropagation	P	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism	IMP
GO:1902600	proton transmembrane transport	AnnotationPropagation	P	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism	IMP
GO:0099132	ATP hydrolysis coupled cation transmembrane transport	AnnotationPropagation	P	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism	IMP
GO:0099131	ATP hydrolysis coupled ion transmembrane transport	AnnotationPropagation	P	GO:0008556	potassium-transporting ATPase activity	IMP
GO:0071805	potassium ion transmembrane transport	AnnotationPropagation	P	GO:0008556	potassium-transporting ATPase activity	IMP
GO:0099132	ATP hydrolysis coupled cation transmembrane transport	AnnotationPropagation	P	GO:0008556	potassium-transporting ATPase activity	IMP
GO:0016310	phosphorylation	AnnotationPropagation	P	GO:0008902	hydroxymethylpyrimidine kinase activity	IMP
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0004777	succinate-semialdehyde dehydrogenase (NAD+) activity	ISS
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0004029	aldehyde dehydrogenase (NAD) activity	IMP
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0030267	glyoxylate reductase (NADP) activity	IDA
GO:0006259	DNA metabolic process	AnnotationPropagation	P	GO:0008296	3'-5'-exodeoxyribonuclease activity	IDA
GO:0090305	nucleic acid phosphodiester bond hydrolysis	AnnotationPropagation	P	GO:0008296	3'-5'-exodeoxyribonuclease activity	IDA
GO:0006508	proteolysis	AnnotationPropagation	P	GO:0004177	aminopeptidase activity	IDA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0015035	protein disulfide oxidoreductase activity	IMP
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0004324	ferredoxin-NADP+ reductase activity	IDA
GO:0016311	dephosphorylation	AnnotationPropagation	P	GO:0050308	sugar-phosphatase activity	IDA
GO:0006479	protein methylation	AnnotationPropagation	P	GO:0008276	protein methyltransferase activity	IDA
GO:0099131	ATP hydrolysis coupled ion transmembrane transport	AnnotationPropagation	P	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism	IDA
GO:1902600	proton transmembrane transport	AnnotationPropagation	P	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism	IDA
GO:0099132	ATP hydrolysis coupled cation transmembrane transport	AnnotationPropagation	P	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism	IDA
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0015292	uniporter activity	IMP
GO:0000160	phosphorelay signal transduction system	AnnotationPropagation	P	GO:0000155	phosphorelay sensor kinase activity	IDA
GO:0018106	peptidyl-histidine phosphorylation	AnnotationPropagation	P	GO:0000155	phosphorelay sensor kinase activity	IDA
GO:0023014	signal transduction by protein phosphorylation	AnnotationPropagation	P	GO:0000155	phosphorelay sensor kinase activity	IDA
GO:0032259	methylation	AnnotationPropagation	P	GO:0003908	methylated-DNA-[protein]-cysteine S-methyltransferase activity	IDA
GO:0022900	electron transport chain	AnnotationPropagation	P	GO:0009055	electron transfer activity	IDA
GO:0090305	nucleic acid phosphodiester bond hydrolysis	AnnotationPropagation	P	GO:0004519	endonuclease activity	IDA
GO:0043086	negative regulation of catalytic activity	AnnotationPropagation	P	GO:0008073	ornithine decarboxylase inhibitor activity	IDA
GO:0016311	dephosphorylation	AnnotationPropagation	P	GO:0004035	alkaline phosphatase activity	IDA
GO:0006259	DNA metabolic process	AnnotationPropagation	P	GO:0043737	deoxyribonuclease V activity	IDA
GO:0090305	nucleic acid phosphodiester bond hydrolysis	AnnotationPropagation	P	GO:0043737	deoxyribonuclease V activity	IDA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0019154	glycolate dehydrogenase activity	IMP
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0008883	glutamyl-tRNA reductase activity	IDA
GO:0031167	rRNA methylation	AnnotationPropagation	P	GO:0009383	rRNA (cytosine-C5-)-methyltransferase activity	IDA
GO:0022900	electron transport chain	AnnotationPropagation	P	GO:0009055	electron transfer activity	IMP
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0042959	alkanesulfonate transmembrane transporter activity	IGI
GO:0042918	alkanesulfonate transport	AnnotationPropagation	P	GO:0042959	alkanesulfonate transmembrane transporter activity	IGI
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0052890	oxidoreductase activity, acting on the CH-CH group of donors, with a flavin as acceptor	IMP
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0019147	(R)-aminopropanol dehydrogenase activity	IDA
GO:0022900	electron transport chain	AnnotationPropagation	P	GO:0009055	electron transfer activity	IMP
GO:0016310	phosphorylation	AnnotationPropagation	P	GO:0004020	adenylylsulfate kinase activity	IDA
GO:0071897	DNA biosynthetic process	AnnotationPropagation	P	GO:0003887	DNA-directed DNA polymerase activity	IDA
GO:0005622	intracellular	AnnotationPropagation	C	GO:0065002	intracellular protein transmembrane transport	IMP
GO:0005623	cell	AnnotationPropagation	C	GO:0065002	intracellular protein transmembrane transport	IMP
GO:0015794	glycerol-3-phosphate transmembrane transport	AnnotationPropagation	P	GO:0015430	glycerol-3-phosphate-transporting ATPase activity	IDA
GO:0006508	proteolysis	AnnotationPropagation	P	GO:0016807	cysteine-type carboxypeptidase activity	IMP
GO:0032775	DNA methylation on adenine	AnnotationPropagation	P	GO:0009007	site-specific DNA-methyltransferase (adenine-specific) activity	IDA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0004155	6,7-dihydropteridine reductase activity	IDA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0008924	malate dehydrogenase (quinone) activity	IDA
GO:0106074	aminoacyl-tRNA metabolism involved in translational fidelity	AnnotationPropagation	P	GO:0002161	aminoacyl-tRNA editing activity	IDA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0008774	acetaldehyde dehydrogenase (acetylating) activity	ISS
GO:0006355	regulation of transcription, DNA-templated	AnnotationPropagation	P	GO:0003700	DNA binding transcription factor activity	IDA
GO:0000160	phosphorelay signal transduction system	AnnotationPropagation	P	GO:0000155	phosphorelay sensor kinase activity	IDA
GO:0018106	peptidyl-histidine phosphorylation	AnnotationPropagation	P	GO:0000155	phosphorelay sensor kinase activity	IDA
GO:0023014	signal transduction by protein phosphorylation	AnnotationPropagation	P	GO:0000155	phosphorelay sensor kinase activity	IDA
GO:0016310	phosphorylation	AnnotationPropagation	P	GO:0004849	uridine kinase activity	IMP
GO:0006222	UMP biosynthetic process	AnnotationPropagation	P	GO:0004849	uridine kinase activity	IMP
GO:0000160	phosphorelay signal transduction system	AnnotationPropagation	P	GO:0000155	phosphorelay sensor kinase activity	IDA
GO:0018106	peptidyl-histidine phosphorylation	AnnotationPropagation	P	GO:0000155	phosphorelay sensor kinase activity	IDA
GO:0023014	signal transduction by protein phosphorylation	AnnotationPropagation	P	GO:0000155	phosphorelay sensor kinase activity	IDA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0008127	quercetin 2,3-dioxygenase activity	IDA
GO:0016311	dephosphorylation	AnnotationPropagation	P	GO:0050308	sugar-phosphatase activity	IDA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0004657	proline dehydrogenase activity	IDA
GO:0006259	DNA metabolic process	AnnotationPropagation	P	GO:1990238	double-stranded DNA endodeoxyribonuclease activity	IDA
GO:0090305	nucleic acid phosphodiester bond hydrolysis	AnnotationPropagation	P	GO:1990238	double-stranded DNA endodeoxyribonuclease activity	IDA
GO:0046835	carbohydrate phosphorylation	AnnotationPropagation	P	GO:0008671	2-dehydro-3-deoxygalactonokinase activity	IDA
GO:0046835	carbohydrate phosphorylation	AnnotationPropagation	P	GO:0004747	ribokinase activity	IDA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0008876	quinoprotein glucose dehydrogenase activity	IDA
GO:0016310	phosphorylation	AnnotationPropagation	P	GO:0004765	shikimate kinase activity	IDA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0004616	phosphogluconate dehydrogenase (decarboxylating) activity	IDA
GO:0000160	phosphorelay signal transduction system	AnnotationPropagation	P	GO:0000155	phosphorelay sensor kinase activity	ISS
GO:0018106	peptidyl-histidine phosphorylation	AnnotationPropagation	P	GO:0000155	phosphorelay sensor kinase activity	ISS
GO:0023014	signal transduction by protein phosphorylation	AnnotationPropagation	P	GO:0000155	phosphorelay sensor kinase activity	ISS
GO:0016310	phosphorylation	AnnotationPropagation	P	GO:0008804	carbamate kinase activity	ISO
GO:0043086	negative regulation of catalytic activity	AnnotationPropagation	P	GO:0060241	lysozyme inhibitor activity	IDA
GO:0071421	manganese ion transmembrane transport	AnnotationPropagation	P	GO:0005384	manganese ion transmembrane transporter activity	IMP
GO:0000160	phosphorelay signal transduction system	AnnotationPropagation	P	GO:0000155	phosphorelay sensor kinase activity	IMP
GO:0018106	peptidyl-histidine phosphorylation	AnnotationPropagation	P	GO:0000155	phosphorelay sensor kinase activity	IMP
GO:0023014	signal transduction by protein phosphorylation	AnnotationPropagation	P	GO:0000155	phosphorelay sensor kinase activity	IMP
GO:0015769	melibiose transport	AnnotationPropagation	P	GO:0015487	melibiose:cation symporter activity	IDA
GO:0034219	carbohydrate transmembrane transport	AnnotationPropagation	P	GO:0015487	melibiose:cation symporter activity	IDA
GO:0098655	cation transmembrane transport	AnnotationPropagation	P	GO:0015487	melibiose:cation symporter activity	IDA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0004784	superoxide dismutase activity	IDA
GO:0019430	removal of superoxide radicals	AnnotationPropagation	P	GO:0004784	superoxide dismutase activity	IDA
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0008381	mechanosensitive ion channel activity	IMP
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0017150	tRNA dihydrouridine synthase activity	IMP
GO:0002943	tRNA dihydrouridine synthesis	AnnotationPropagation	P	GO:0017150	tRNA dihydrouridine synthase activity	IMP
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0016491	oxidoreductase activity	IDA
GO:0016310	phosphorylation	AnnotationPropagation	P	GO:0003951	NAD+ kinase activity	ISS
GO:0016311	dephosphorylation	AnnotationPropagation	P	GO:0008934	inositol monophosphate 1-phosphatase activity	IDA
GO:0005623	cell	AnnotationPropagation	C	GO:0006879	cellular iron ion homeostasis	IEP
GO:0006508	proteolysis	AnnotationPropagation	P	GO:0004252	serine-type endopeptidase activity	IMP
GO:0022900	electron transport chain	AnnotationPropagation	P	GO:0009055	electron transfer activity	IDA
GO:0022900	electron transport chain	AnnotationPropagation	P	GO:0009055	electron transfer activity	IDA
GO:0006569	tryptophan catabolic process	AnnotationPropagation	P	GO:0009034	tryptophanase activity	IMP
GO:0099131	ATP hydrolysis coupled ion transmembrane transport	AnnotationPropagation	P	GO:0008556	potassium-transporting ATPase activity	IMP
GO:0071805	potassium ion transmembrane transport	AnnotationPropagation	P	GO:0008556	potassium-transporting ATPase activity	IMP
GO:0099132	ATP hydrolysis coupled cation transmembrane transport	AnnotationPropagation	P	GO:0008556	potassium-transporting ATPase activity	IMP
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0004602	glutathione peroxidase activity	IDA
GO:0098869	cellular oxidant detoxification	AnnotationPropagation	P	GO:0004602	glutathione peroxidase activity	IDA
GO:1903506	regulation of nucleic acid-templated transcription	AnnotationPropagation	P	GO:0016989	sigma factor antagonist activity	IMP
GO:0022900	electron transport chain	AnnotationPropagation	P	GO:0009055	electron transfer activity	IDA
GO:0035335	peptidyl-tyrosine dephosphorylation	AnnotationPropagation	P	GO:0004725	protein tyrosine phosphatase activity	IDA
GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic	AnnotationPropagation	P	GO:0004523	RNA-DNA hybrid ribonuclease activity	IDA
GO:0035873	lactate transmembrane transport	AnnotationPropagation	P	GO:0015129	lactate transmembrane transporter activity	IGI
GO:1903506	regulation of nucleic acid-templated transcription	AnnotationPropagation	P	GO:0016989	sigma factor antagonist activity	IDA
GO:0099131	ATP hydrolysis coupled ion transmembrane transport	AnnotationPropagation	P	GO:0015413	nickel-transporting ATPase activity	ISS
GO:0099132	ATP hydrolysis coupled cation transmembrane transport	AnnotationPropagation	P	GO:0015413	nickel-transporting ATPase activity	ISS
GO:0072511	divalent inorganic cation transport	AnnotationPropagation	P	GO:0015413	nickel-transporting ATPase activity	ISS
GO:0035444	nickel cation transmembrane transport	AnnotationPropagation	P	GO:0015413	nickel-transporting ATPase activity	ISS
GO:0016311	dephosphorylation	AnnotationPropagation	P	GO:0008962	phosphatidylglycerophosphatase activity	IMP
GO:0032508	DNA duplex unwinding	AnnotationPropagation	P	GO:0004003	ATP-dependent DNA helicase activity	IDA
GO:0006508	proteolysis	AnnotationPropagation	P	GO:0016807	cysteine-type carboxypeptidase activity	IMP
GO:0022900	electron transport chain	AnnotationPropagation	P	GO:0009055	electron transfer activity	IDA
GO:0099131	ATP hydrolysis coupled ion transmembrane transport	AnnotationPropagation	P	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism	IMP
GO:1902600	proton transmembrane transport	AnnotationPropagation	P	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism	IMP
GO:0099132	ATP hydrolysis coupled cation transmembrane transport	AnnotationPropagation	P	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism	IMP
GO:0000160	phosphorelay signal transduction system	AnnotationPropagation	P	GO:0000155	phosphorelay sensor kinase activity	IDA
GO:0018106	peptidyl-histidine phosphorylation	AnnotationPropagation	P	GO:0000155	phosphorelay sensor kinase activity	IDA
GO:0023014	signal transduction by protein phosphorylation	AnnotationPropagation	P	GO:0000155	phosphorelay sensor kinase activity	IDA
GO:0006355	regulation of transcription, DNA-templated	AnnotationPropagation	P	GO:0003700	DNA binding transcription factor activity	IDA
GO:1902476	chloride transmembrane transport	AnnotationPropagation	P	GO:0005254	chloride channel activity	RCA
GO:0005622	intracellular	AnnotationPropagation	C	GO:0000160	phosphorelay signal transduction system	ISS
GO:0006355	regulation of transcription, DNA-templated	AnnotationPropagation	P	GO:0003700	DNA binding transcription factor activity	IDA
GO:0006508	proteolysis	AnnotationPropagation	P	GO:0009002	serine-type D-Ala-D-Ala carboxypeptidase activity	IDA
GO:1903711	spermidine transmembrane transport	AnnotationPropagation	P	GO:0015606	spermidine transmembrane transporter activity	IMP
GO:0006177	GMP biosynthetic process	AnnotationPropagation	P	GO:0003921	GMP synthase activity	IDA
GO:0006355	regulation of transcription, DNA-templated	AnnotationPropagation	P	GO:0003700	DNA binding transcription factor activity	IDA
GO:0000160	phosphorelay signal transduction system	AnnotationPropagation	P	GO:0000155	phosphorelay sensor kinase activity	IDA
GO:0018106	peptidyl-histidine phosphorylation	AnnotationPropagation	P	GO:0000155	phosphorelay sensor kinase activity	IDA
GO:0023014	signal transduction by protein phosphorylation	AnnotationPropagation	P	GO:0000155	phosphorelay sensor kinase activity	IDA
GO:0005623	cell	AnnotationPropagation	C	GO:0009992	cellular water homeostasis	IMP
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0004146	dihydrofolate reductase activity	IDA
GO:0015847	putrescine transport	AnnotationPropagation	P	GO:0015489	putrescine transmembrane transporter activity	EXP
GO:1902047	polyamine transmembrane transport	AnnotationPropagation	P	GO:0015489	putrescine transmembrane transporter activity	EXP
GO:0072488	ammonium transmembrane transport	AnnotationPropagation	P	GO:0015489	putrescine transmembrane transporter activity	EXP
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0042380	hydroxymethylbutenyl pyrophosphate reductase activity	IDA
GO:0006508	proteolysis	AnnotationPropagation	P	GO:0004180	carboxypeptidase activity	IMP
GO:0046939	nucleotide phosphorylation	AnnotationPropagation	P	GO:0004127	cytidylate kinase activity	IDA
GO:0005623	cell	AnnotationPropagation	C	GO:0006878	cellular copper ion homeostasis	IGI
GO:0000160	phosphorelay signal transduction system	AnnotationPropagation	P	GO:0000156	phosphorelay response regulator activity	IDA
GO:0006355	regulation of transcription, DNA-templated	AnnotationPropagation	P	GO:0003700	DNA binding transcription factor activity	IDA
GO:0022900	electron transport chain	AnnotationPropagation	P	GO:0009055	electron transfer activity	IDA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0016491	oxidoreductase activity	IDA
GO:0016310	phosphorylation	AnnotationPropagation	P	GO:0046316	gluconokinase activity	IDA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0004450	isocitrate dehydrogenase (NADP+) activity	IDA
GO:0035873	lactate transmembrane transport	AnnotationPropagation	P	GO:0015129	lactate transmembrane transporter activity	IGI
GO:0005622	intracellular	AnnotationPropagation	C	GO:0065002	intracellular protein transmembrane transport	IDA
GO:0005623	cell	AnnotationPropagation	C	GO:0065002	intracellular protein transmembrane transport	IDA
GO:0016310	phosphorylation	AnnotationPropagation	P	GO:0008776	acetate kinase activity	IDA
GO:0016310	phosphorylation	AnnotationPropagation	P	GO:0008976	polyphosphate kinase activity	IDA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0017150	tRNA dihydrouridine synthase activity	IMP
GO:0002943	tRNA dihydrouridine synthesis	AnnotationPropagation	P	GO:0017150	tRNA dihydrouridine synthase activity	IMP
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0015297	antiporter activity	ISS
GO:0032259	methylation	AnnotationPropagation	P	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	IDA
GO:0022900	electron transport chain	AnnotationPropagation	P	GO:0009055	electron transfer activity	IDA
GO:0005623	cell	AnnotationPropagation	C	GO:0051454	intracellular pH elevation	IMP
GO:0015707	nitrite transport	AnnotationPropagation	P	GO:0015514	nitrite efflux transmembrane transporter activity	IGI
GO:0098656	anion transmembrane transport	AnnotationPropagation	P	GO:0015514	nitrite efflux transmembrane transporter activity	IGI
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0015293	symporter activity	IMP
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0008677	2-dehydropantoate 2-reductase activity	IDA
GO:0043086	negative regulation of catalytic activity	AnnotationPropagation	P	GO:0008428	ribonuclease inhibitor activity	IDA
GO:1903785	L-valine transmembrane transport	AnnotationPropagation	P	GO:0005304	L-valine transmembrane transporter activity	IMP
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0008831	dTDP-4-dehydrorhamnose reductase activity	ISS
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0047577	4-hydroxybutyrate dehydrogenase activity	IDA
GO:0006508	proteolysis	AnnotationPropagation	P	GO:0004177	aminopeptidase activity	IDA
GO:0099131	ATP hydrolysis coupled ion transmembrane transport	AnnotationPropagation	P	GO:0008556	potassium-transporting ATPase activity	IMP
GO:0071805	potassium ion transmembrane transport	AnnotationPropagation	P	GO:0008556	potassium-transporting ATPase activity	IMP
GO:0099132	ATP hydrolysis coupled cation transmembrane transport	AnnotationPropagation	P	GO:0008556	potassium-transporting ATPase activity	IMP
GO:0006355	regulation of transcription, DNA-templated	AnnotationPropagation	P	GO:0003700	DNA binding transcription factor activity	IDA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0004601	peroxidase activity	IDA
GO:0098869	cellular oxidant detoxification	AnnotationPropagation	P	GO:0004601	peroxidase activity	IDA
GO:0006355	regulation of transcription, DNA-templated	AnnotationPropagation	P	GO:0003700	DNA binding transcription factor activity	IDA
GO:0035429	gluconate transmembrane transport	AnnotationPropagation	P	GO:0015128	gluconate transmembrane transporter activity	IDA
GO:0031167	rRNA methylation	AnnotationPropagation	P	GO:0070038	rRNA (pseudouridine-N3-)-methyltransferase activity	IMP
GO:0015839	cadaverine transport	AnnotationPropagation	P	GO:0043872	lysine:cadaverine antiporter activity	IDA
GO:1903401	L-lysine transmembrane transport	AnnotationPropagation	P	GO:0043872	lysine:cadaverine antiporter activity	IDA
GO:1990822	basic amino acid transmembrane transport	AnnotationPropagation	P	GO:0043872	lysine:cadaverine antiporter activity	IDA
GO:0072488	ammonium transmembrane transport	AnnotationPropagation	P	GO:0043872	lysine:cadaverine antiporter activity	IDA
GO:0043085	positive regulation of catalytic activity	AnnotationPropagation	P	GO:0008047	enzyme activator activity	IDA
GO:0046835	carbohydrate phosphorylation	AnnotationPropagation	P	GO:0008673	2-dehydro-3-deoxygluconokinase activity	IDA
GO:0005622	intracellular	AnnotationPropagation	C	GO:0000160	phosphorelay signal transduction system	IDA
GO:0006355	regulation of transcription, DNA-templated	AnnotationPropagation	P	GO:0003700	DNA binding transcription factor activity	ISS
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0050577	GDP-L-fucose synthase activity	IDA
GO:0042350	GDP-L-fucose biosynthetic process	AnnotationPropagation	P	GO:0050577	GDP-L-fucose synthase activity	IDA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0016491	oxidoreductase activity	TAS
GO:0006508	proteolysis	AnnotationPropagation	P	GO:0004175	endopeptidase activity	RCA
GO:0006259	DNA metabolic process	AnnotationPropagation	P	GO:0008821	crossover junction endodeoxyribonuclease activity	IDA
GO:0090305	nucleic acid phosphodiester bond hydrolysis	AnnotationPropagation	P	GO:0008821	crossover junction endodeoxyribonuclease activity	IDA
GO:0106004	tRNA (guanine-N7)-methylation	AnnotationPropagation	P	GO:0008176	tRNA (guanine-N7-)-methyltransferase activity	IDA
GO:0006165	nucleoside diphosphate phosphorylation	AnnotationPropagation	P	GO:0004550	nucleoside diphosphate kinase activity	IDA
GO:0016310	phosphorylation	AnnotationPropagation	P	GO:0016301	kinase activity	IDA
GO:0006355	regulation of transcription, DNA-templated	AnnotationPropagation	P	GO:0003700	DNA binding transcription factor activity	IDA
GO:0016310	phosphorylation	AnnotationPropagation	P	GO:0008906	inosine kinase activity	IDA
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0042626	ATPase activity, coupled to transmembrane movement of substances	ISS
GO:1903506	regulation of nucleic acid-templated transcription	AnnotationPropagation	P	GO:0016989	sigma factor antagonist activity	IDA
GO:0016311	dephosphorylation	AnnotationPropagation	P	GO:0016791	phosphatase activity	IDA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0008866	fructuronate reductase activity	IDA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0004345	glucose-6-phosphate dehydrogenase activity	IDA
GO:0005623	cell	AnnotationPropagation	C	GO:0006883	cellular sodium ion homeostasis	IGI
GO:0035429	gluconate transmembrane transport	AnnotationPropagation	P	GO:0015128	gluconate transmembrane transporter activity	IGI
GO:0000160	phosphorelay signal transduction system	AnnotationPropagation	P	GO:0000155	phosphorelay sensor kinase activity	IDA
GO:0018106	peptidyl-histidine phosphorylation	AnnotationPropagation	P	GO:0000155	phosphorelay sensor kinase activity	IDA
GO:0023014	signal transduction by protein phosphorylation	AnnotationPropagation	P	GO:0000155	phosphorelay sensor kinase activity	IDA
GO:0046835	carbohydrate phosphorylation	AnnotationPropagation	P	GO:0008741	ribulokinase activity	IDA
GO:0016311	dephosphorylation	AnnotationPropagation	P	GO:0016791	phosphatase activity	IDA
GO:0032259	methylation	AnnotationPropagation	P	GO:0003908	methylated-DNA-[protein]-cysteine S-methyltransferase activity	IDA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0008137	NADH dehydrogenase (ubiquinone) activity	IMP
GO:0016310	phosphorylation	AnnotationPropagation	P	GO:0004797	thymidine kinase activity	IDA
GO:0009165	nucleotide biosynthetic process	AnnotationPropagation	P	GO:0004797	thymidine kinase activity	IDA
GO:0009157	deoxyribonucleoside monophosphate biosynthetic process	AnnotationPropagation	P	GO:0004797	thymidine kinase activity	IDA
GO:0006591	ornithine metabolic process	AnnotationPropagation	P	GO:0004585	ornithine carbamoyltransferase activity	IDA
GO:0016311	dephosphorylation	AnnotationPropagation	P	GO:0016791	phosphatase activity	IDA
GO:0006355	regulation of transcription, DNA-templated	AnnotationPropagation	P	GO:0003700	DNA binding transcription factor activity	ISS
GO:0046835	carbohydrate phosphorylation	AnnotationPropagation	P	GO:0008787	allose kinase activity	IDA
GO:0006355	regulation of transcription, DNA-templated	AnnotationPropagation	P	GO:0003700	DNA binding transcription factor activity	IDA
GO:0046835	carbohydrate phosphorylation	AnnotationPropagation	P	GO:0004335	galactokinase activity	IDA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0004791	thioredoxin-disulfide reductase activity	IDA
GO:0098869	cellular oxidant detoxification	AnnotationPropagation	P	GO:0004791	thioredoxin-disulfide reductase activity	IDA
GO:0031167	rRNA methylation	AnnotationPropagation	P	GO:0000179	rRNA (adenine-N6,N6-)-dimethyltransferase activity	IDA
GO:0000160	phosphorelay signal transduction system	AnnotationPropagation	P	GO:0000155	phosphorelay sensor kinase activity	IMP
GO:0018106	peptidyl-histidine phosphorylation	AnnotationPropagation	P	GO:0000155	phosphorelay sensor kinase activity	IMP
GO:0023014	signal transduction by protein phosphorylation	AnnotationPropagation	P	GO:0000155	phosphorelay sensor kinase activity	IMP
GO:0009103	lipopolysaccharide biosynthetic process	AnnotationPropagation	P	GO:0047270	lipopolysaccharide glucosyltransferase II activity	IDA
GO:0016311	dephosphorylation	AnnotationPropagation	P	GO:0004805	trehalose-phosphatase activity	IDA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0008752	FMN reductase activity	IDA
GO:0070476	rRNA (guanine-N7)-methylation	AnnotationPropagation	P	GO:0070043	rRNA (guanine-N7-)-methyltransferase activity	IDA
GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic	AnnotationPropagation	P	GO:0004521	endoribonuclease activity	IDA
GO:1902047	polyamine transmembrane transport	AnnotationPropagation	P	GO:0015417	polyamine-transporting ATPase activity	IMP
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0008940	nitrate reductase activity	IDA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0050626	trimethylamine-N-oxide reductase (cytochrome c) activity	IDA
GO:0006468	protein phosphorylation	AnnotationPropagation	P	GO:0004672	protein kinase activity	IDA
GO:0099131	ATP hydrolysis coupled ion transmembrane transport	AnnotationPropagation	P	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism	IMP
GO:1902600	proton transmembrane transport	AnnotationPropagation	P	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism	IMP
GO:0099132	ATP hydrolysis coupled cation transmembrane transport	AnnotationPropagation	P	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism	IMP
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0047070	3-carboxyethylcatechol 2,3-dioxygenase activity	IDA
GO:0032775	DNA methylation on adenine	AnnotationPropagation	P	GO:0009007	site-specific DNA-methyltransferase (adenine-specific) activity	IDA
GO:0000160	phosphorelay signal transduction system	AnnotationPropagation	P	GO:0000155	phosphorelay sensor kinase activity	IDA
GO:0018106	peptidyl-histidine phosphorylation	AnnotationPropagation	P	GO:0000155	phosphorelay sensor kinase activity	IDA
GO:0023014	signal transduction by protein phosphorylation	AnnotationPropagation	P	GO:0000155	phosphorelay sensor kinase activity	IDA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0008957	phenylacetaldehyde dehydrogenase activity	IDA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0008734	L-aspartate oxidase activity	IDA
GO:0006355	regulation of transcription, DNA-templated	AnnotationPropagation	P	GO:0003700	DNA binding transcription factor activity	IDA
GO:0006470	protein dephosphorylation	AnnotationPropagation	P	GO:0008138	protein tyrosine/serine/threonine phosphatase activity	IDA
GO:0022900	electron transport chain	AnnotationPropagation	P	GO:0009055	electron transfer activity	IDA
GO:0000160	phosphorelay signal transduction system	AnnotationPropagation	P	GO:0000156	phosphorelay response regulator activity	IDA
GO:0071806	protein transmembrane transport	AnnotationPropagation	P	GO:0009977	proton motive force dependent protein transmembrane transporter activity	IDA
GO:0034219	carbohydrate transmembrane transport	AnnotationPropagation	P	GO:0015254	glycerol channel activity	IDA
GO:0015793	glycerol transport	AnnotationPropagation	P	GO:0015254	glycerol channel activity	IDA
GO:0015768	maltose transport	AnnotationPropagation	P	GO:0015423	maltose-transporting ATPase activity	IDA
GO:0034219	carbohydrate transmembrane transport	AnnotationPropagation	P	GO:0015423	maltose-transporting ATPase activity	IDA
GO:0000160	phosphorelay signal transduction system	AnnotationPropagation	P	GO:0000155	phosphorelay sensor kinase activity	IMP
GO:0018106	peptidyl-histidine phosphorylation	AnnotationPropagation	P	GO:0000155	phosphorelay sensor kinase activity	IMP
GO:0023014	signal transduction by protein phosphorylation	AnnotationPropagation	P	GO:0000155	phosphorelay sensor kinase activity	IMP
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0043365	[formate-C-acetyltransferase]-activating enzyme activity	IDA
GO:0005623	cell	AnnotationPropagation	C	GO:0006879	cellular iron ion homeostasis	IGI
GO:0005622	intracellular	AnnotationPropagation	C	GO:0000160	phosphorelay signal transduction system	IDA
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0022857	transmembrane transporter activity	RCA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0004729	oxygen-dependent protoporphyrinogen oxidase activity	IDA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0004029	aldehyde dehydrogenase (NAD) activity	IDA
GO:0015707	nitrite transport	AnnotationPropagation	P	GO:0015514	nitrite efflux transmembrane transporter activity	IGI
GO:0098656	anion transmembrane transport	AnnotationPropagation	P	GO:0015514	nitrite efflux transmembrane transporter activity	IGI
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0004784	superoxide dismutase activity	IDA
GO:0019430	removal of superoxide radicals	AnnotationPropagation	P	GO:0004784	superoxide dismutase activity	IDA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0004489	methylenetetrahydrofolate reductase (NAD(P)H) activity	IDA
GO:0006355	regulation of transcription, DNA-templated	AnnotationPropagation	P	GO:0003700	DNA binding transcription factor activity	IDA
GO:0015768	maltose transport	AnnotationPropagation	P	GO:0015423	maltose-transporting ATPase activity	IDA
GO:0034219	carbohydrate transmembrane transport	AnnotationPropagation	P	GO:0015423	maltose-transporting ATPase activity	IDA
GO:0016311	dephosphorylation	AnnotationPropagation	P	GO:0019143	3-deoxy-manno-octulosonate-8-phosphatase activity	ISO
GO:0006310	DNA recombination	AnnotationPropagation	P	GO:0008979	prophage integrase activity	IMP
GO:0015074	DNA integration	AnnotationPropagation	P	GO:0008979	prophage integrase activity	IMP
GO:0075713	establishment of integrated proviral latency	AnnotationPropagation	P	GO:0008979	prophage integrase activity	IMP
GO:0006259	DNA metabolic process	AnnotationPropagation	P	GO:0015666	restriction endodeoxyribonuclease activity	IMP
GO:0090305	nucleic acid phosphodiester bond hydrolysis	AnnotationPropagation	P	GO:0015666	restriction endodeoxyribonuclease activity	IMP
GO:0046834	lipid phosphorylation	AnnotationPropagation	P	GO:0001727	lipid kinase activity	IDA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0004784	superoxide dismutase activity	IDA
GO:0019430	removal of superoxide radicals	AnnotationPropagation	P	GO:0004784	superoxide dismutase activity	IDA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0004368	glycerol-3-phosphate dehydrogenase activity	IDA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0008137	NADH dehydrogenase (ubiquinone) activity	ISS
GO:0031564	transcription antitermination	AnnotationPropagation	P	GO:0001073	transcription antitermination factor activity, DNA binding	IDA
GO:0006355	regulation of transcription, DNA-templated	AnnotationPropagation	P	GO:0003700	DNA binding transcription factor activity	IDA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0004591	oxoglutarate dehydrogenase (succinyl-transferring) activity	IDA
GO:0015749	monosaccharide transmembrane transport	AnnotationPropagation	P	GO:0015407	monosaccharide-transporting ATPase activity	IMP
GO:0005623	cell	AnnotationPropagation	C	GO:0051454	intracellular pH elevation	IMP
GO:0030488	tRNA methylation	AnnotationPropagation	P	GO:0009020	tRNA (guanosine-2'-O-)-methyltransferase activity	IDA
GO:0000160	phosphorelay signal transduction system	AnnotationPropagation	P	GO:0000156	phosphorelay response regulator activity	IDA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0008703	5-amino-6-(5-phosphoribosylamino)uracil reductase activity	IDA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0008941	nitric oxide dioxygenase activity	IMP
GO:0090305	nucleic acid phosphodiester bond hydrolysis	AnnotationPropagation	P	GO:0004519	endonuclease activity	IDA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0008718	D-amino-acid dehydrogenase activity	IDA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0003862	3-isopropylmalate dehydrogenase activity	IDA
GO:0090305	nucleic acid phosphodiester bond hydrolysis	AnnotationPropagation	P	GO:0004527	exonuclease activity	IDA
GO:0016311	dephosphorylation	AnnotationPropagation	P	GO:0016791	phosphatase activity	IDA
GO:0043086	negative regulation of catalytic activity	AnnotationPropagation	P	GO:0004857	enzyme inhibitor activity	IMP
GO:0031167	rRNA methylation	AnnotationPropagation	P	GO:0009383	rRNA (cytosine-C5-)-methyltransferase activity	IDA
GO:0046835	carbohydrate phosphorylation	AnnotationPropagation	P	GO:0004340	glucokinase activity	IDA
GO:0051156	glucose 6-phosphate metabolic process	AnnotationPropagation	P	GO:0004340	glucokinase activity	IDA
GO:0099131	ATP hydrolysis coupled ion transmembrane transport	AnnotationPropagation	P	GO:0016463	zinc-exporting ATPase activity	IDA
GO:0099132	ATP hydrolysis coupled cation transmembrane transport	AnnotationPropagation	P	GO:0016463	zinc-exporting ATPase activity	IDA
GO:0071577	zinc ion transmembrane transport	AnnotationPropagation	P	GO:0016463	zinc-exporting ATPase activity	IDA
GO:0016310	phosphorylation	AnnotationPropagation	P	GO:0046316	gluconokinase activity	IDA
GO:0035672	oligopeptide transmembrane transport	AnnotationPropagation	P	GO:0042937	tripeptide transmembrane transporter activity	IMP
GO:0042939	tripeptide transport	AnnotationPropagation	P	GO:0042937	tripeptide transmembrane transporter activity	IMP
GO:0106074	aminoacyl-tRNA metabolism involved in translational fidelity	AnnotationPropagation	P	GO:0002161	aminoacyl-tRNA editing activity	IDA
GO:0015749	monosaccharide transmembrane transport	AnnotationPropagation	P	GO:0015407	monosaccharide-transporting ATPase activity	IDA
GO:0071806	protein transmembrane transport	AnnotationPropagation	P	GO:0009977	proton motive force dependent protein transmembrane transporter activity	IDA
GO:0006470	protein dephosphorylation	AnnotationPropagation	P	GO:0004721	phosphoprotein phosphatase activity	IDA
GO:0000413	protein peptidyl-prolyl isomerization	AnnotationPropagation	P	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IDA
GO:0016310	phosphorylation	AnnotationPropagation	P	GO:0004756	selenide, water dikinase activity	IDA
GO:0006355	regulation of transcription, DNA-templated	AnnotationPropagation	P	GO:0003700	DNA binding transcription factor activity	IDA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0004748	ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor	IDA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0004854	xanthine dehydrogenase activity	IGI
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0015288	porin activity	IDA
GO:0016311	dephosphorylation	AnnotationPropagation	P	GO:0008962	phosphatidylglycerophosphatase activity	IMP
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0019145	aminobutyraldehyde dehydrogenase activity	IDA
GO:0016311	dephosphorylation	AnnotationPropagation	P	GO:0042132	fructose 1,6-bisphosphate 1-phosphatase activity	IDA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0009026	tagaturonate reductase activity	IDA
GO:0046939	nucleotide phosphorylation	AnnotationPropagation	P	GO:0004017	adenylate kinase activity	IDA
GO:0022900	electron transport chain	AnnotationPropagation	P	GO:0009055	electron transfer activity	IDA
GO:0016311	dephosphorylation	AnnotationPropagation	P	GO:0008967	phosphoglycolate phosphatase activity	IDA
GO:0034219	carbohydrate transmembrane transport	AnnotationPropagation	P	GO:0015144	carbohydrate transmembrane transporter activity	ISS
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0017150	tRNA dihydrouridine synthase activity	IMP
GO:0002943	tRNA dihydrouridine synthesis	AnnotationPropagation	P	GO:0017150	tRNA dihydrouridine synthase activity	IMP
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0015293	symporter activity	IDA
GO:0006355	regulation of transcription, DNA-templated	AnnotationPropagation	P	GO:0003700	DNA binding transcription factor activity	IDA
GO:0006355	regulation of transcription, DNA-templated	AnnotationPropagation	P	GO:0003700	DNA binding transcription factor activity	IDA
GO:0022900	electron transport chain	AnnotationPropagation	P	GO:0009055	electron transfer activity	IDA
GO:0019805	quinolinate biosynthetic process	AnnotationPropagation	P	GO:0008987	quinolinate synthetase A activity	IDA
GO:0043086	negative regulation of catalytic activity	AnnotationPropagation	P	GO:0060241	lysozyme inhibitor activity	IDA
GO:0000413	protein peptidyl-prolyl isomerization	AnnotationPropagation	P	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IDA
GO:0046710	GDP metabolic process	AnnotationPropagation	P	GO:0004385	guanylate kinase activity	IDA
GO:0046939	nucleotide phosphorylation	AnnotationPropagation	P	GO:0004385	guanylate kinase activity	IDA
GO:0046037	GMP metabolic process	AnnotationPropagation	P	GO:0004385	guanylate kinase activity	IDA
GO:0032259	methylation	AnnotationPropagation	P	GO:0004799	thymidylate synthase activity	IDA
GO:0000160	phosphorelay signal transduction system	AnnotationPropagation	P	GO:0000155	phosphorelay sensor kinase activity	IMP
GO:0018106	peptidyl-histidine phosphorylation	AnnotationPropagation	P	GO:0000155	phosphorelay sensor kinase activity	IMP
GO:0023014	signal transduction by protein phosphorylation	AnnotationPropagation	P	GO:0000155	phosphorelay sensor kinase activity	IMP
GO:0016311	dephosphorylation	AnnotationPropagation	P	GO:0042132	fructose 1,6-bisphosphate 1-phosphatase activity	IDA
GO:0006479	protein methylation	AnnotationPropagation	P	GO:0004719	protein-L-isoaspartate (D-aspartate) O-methyltransferase activity	IDA
GO:0000160	phosphorelay signal transduction system	AnnotationPropagation	P	GO:0000156	phosphorelay response regulator activity	IDA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0008926	mannitol-1-phosphate 5-dehydrogenase activity	IDA
GO:0006508	proteolysis	AnnotationPropagation	P	GO:0045148	tripeptide aminopeptidase activity	IDA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0031132	serine 3-dehydrogenase activity	IDA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0004096	catalase activity	IDA
GO:0098869	cellular oxidant detoxification	AnnotationPropagation	P	GO:0004096	catalase activity	IDA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0004735	pyrroline-5-carboxylate reductase activity	IDA
GO:0006413	translational initiation	AnnotationPropagation	P	GO:0004479	methionyl-tRNA formyltransferase activity	IDA
GO:0071951	conversion of methionyl-tRNA to N-formyl-methionyl-tRNA	AnnotationPropagation	P	GO:0004479	methionyl-tRNA formyltransferase activity	IDA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0008688	3-(3-hydroxyphenyl)propionate hydroxylase activity	IGI
GO:0006355	regulation of transcription, DNA-templated	AnnotationPropagation	P	GO:0003700	DNA binding transcription factor activity	IDA
GO:0006355	regulation of transcription, DNA-templated	AnnotationPropagation	P	GO:0003700	DNA binding transcription factor activity	IDA
GO:0032259	methylation	AnnotationPropagation	P	GO:0030798	trans-aconitate 2-methyltransferase activity	IDA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0008940	nitrate reductase activity	IDA
GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic	AnnotationPropagation	P	GO:0004525	ribonuclease III activity	IDA
GO:0006310	DNA recombination	AnnotationPropagation	P	GO:0008979	prophage integrase activity	ISS
GO:0015074	DNA integration	AnnotationPropagation	P	GO:0008979	prophage integrase activity	ISS
GO:0075713	establishment of integrated proviral latency	AnnotationPropagation	P	GO:0008979	prophage integrase activity	ISS
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0015035	protein disulfide oxidoreductase activity	IMP
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0016706	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	IDA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0004152	dihydroorotate dehydrogenase activity	IDA
GO:0031167	rRNA methylation	AnnotationPropagation	P	GO:0016436	rRNA (uridine) methyltransferase activity	IMP
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0004318	enoyl-[acyl-carrier-protein] reductase (NADH) activity	IDA
GO:0031167	rRNA methylation	AnnotationPropagation	P	GO:0070042	rRNA (uridine-N3-)-methyltransferase activity	IDA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0004109	coproporphyrinogen oxidase activity	IDA
GO:0005622	intracellular	AnnotationPropagation	C	GO:0000160	phosphorelay signal transduction system	IMP
GO:1903711	spermidine transmembrane transport	AnnotationPropagation	P	GO:0015606	spermidine transmembrane transporter activity	IMP
GO:0031167	rRNA methylation	AnnotationPropagation	P	GO:0008650	rRNA (uridine-2'-O-)-methyltransferase activity	IDA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0008131	primary amine oxidase activity	IDA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0008748	N-ethylmaleimide reductase activity	IDA
GO:0006508	proteolysis	AnnotationPropagation	P	GO:0016807	cysteine-type carboxypeptidase activity	IMP
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0008470	isovaleryl-CoA dehydrogenase activity	IDA
GO:0099131	ATP hydrolysis coupled ion transmembrane transport	AnnotationPropagation	P	GO:0015662	ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	IDA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0008940	nitrate reductase activity	IDA
GO:0000160	phosphorelay signal transduction system	AnnotationPropagation	P	GO:0000156	phosphorelay response regulator activity	IDA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0030604	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity	IDA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0015035	protein disulfide oxidoreductase activity	IDA
GO:0046835	carbohydrate phosphorylation	AnnotationPropagation	P	GO:0008744	L-xylulokinase activity	IDA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0008670	2,4-dienoyl-CoA reductase (NADPH) activity	IDA
GO:0001676	long-chain fatty acid metabolic process	AnnotationPropagation	P	GO:0004467	long-chain fatty acid-CoA ligase activity	IDA
GO:0006355	regulation of transcription, DNA-templated	AnnotationPropagation	P	GO:0003700	DNA binding transcription factor activity	ISS
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0008874	gluconate 5-dehydrogenase activity	IDA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0016491	oxidoreductase activity	IMP
GO:0006355	regulation of transcription, DNA-templated	AnnotationPropagation	P	GO:0003700	DNA binding transcription factor activity	IDA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0030267	glyoxylate reductase (NADP) activity	IDA
GO:0016310	phosphorylation	AnnotationPropagation	P	GO:0050515	4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity	IDA
GO:0099131	ATP hydrolysis coupled ion transmembrane transport	AnnotationPropagation	P	GO:0015413	nickel-transporting ATPase activity	ISS
GO:0099132	ATP hydrolysis coupled cation transmembrane transport	AnnotationPropagation	P	GO:0015413	nickel-transporting ATPase activity	ISS
GO:0072511	divalent inorganic cation transport	AnnotationPropagation	P	GO:0015413	nickel-transporting ATPase activity	ISS
GO:0035444	nickel cation transmembrane transport	AnnotationPropagation	P	GO:0015413	nickel-transporting ATPase activity	ISS
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0047952	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity	IDA
GO:0016310	phosphorylation	AnnotationPropagation	P	GO:0016301	kinase activity	IGI
GO:0090305	nucleic acid phosphodiester bond hydrolysis	AnnotationPropagation	P	GO:0004518	nuclease activity	ISS
GO:0022900	electron transport chain	AnnotationPropagation	P	GO:0009055	electron transfer activity	IDA
GO:0006266	DNA ligation	AnnotationPropagation	P	GO:0003911	DNA ligase (NAD+) activity	IDA
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0015288	porin activity	IDA
GO:0016310	phosphorylation	AnnotationPropagation	P	GO:0008776	acetate kinase activity	IDA
GO:0000162	tryptophan biosynthetic process	AnnotationPropagation	P	GO:0004834	tryptophan synthase activity	IDA
GO:0000160	phosphorelay signal transduction system	AnnotationPropagation	P	GO:0000155	phosphorelay sensor kinase activity	RCA
GO:0018106	peptidyl-histidine phosphorylation	AnnotationPropagation	P	GO:0000155	phosphorelay sensor kinase activity	RCA
GO:0023014	signal transduction by protein phosphorylation	AnnotationPropagation	P	GO:0000155	phosphorelay sensor kinase activity	RCA
GO:0016311	dephosphorylation	AnnotationPropagation	P	GO:0004647	phosphoserine phosphatase activity	IDA
GO:0022900	electron transport chain	AnnotationPropagation	P	GO:0009055	electron transfer activity	IDA
GO:0015804	neutral amino acid transport	AnnotationPropagation	P	GO:0015190	L-leucine transmembrane transporter activity	IMP
GO:0015803	branched-chain amino acid transport	AnnotationPropagation	P	GO:0015190	L-leucine transmembrane transporter activity	IMP
GO:0098655	cation transmembrane transport	AnnotationPropagation	P	GO:0015190	L-leucine transmembrane transporter activity	IMP
GO:1902475	L-alpha-amino acid transmembrane transport	AnnotationPropagation	P	GO:0015190	L-leucine transmembrane transporter activity	IMP
GO:0006355	regulation of transcription, DNA-templated	AnnotationPropagation	P	GO:0003700	DNA binding transcription factor activity	IDA
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0042959	alkanesulfonate transmembrane transporter activity	IGI
GO:0042918	alkanesulfonate transport	AnnotationPropagation	P	GO:0042959	alkanesulfonate transmembrane transporter activity	IGI
GO:0009103	lipopolysaccharide biosynthetic process	AnnotationPropagation	P	GO:0008917	lipopolysaccharide N-acetylglucosaminyltransferase activity	IMP
GO:0022900	electron transport chain	AnnotationPropagation	P	GO:0009055	electron transfer activity	IDA
GO:0000160	phosphorelay signal transduction system	AnnotationPropagation	P	GO:0000155	phosphorelay sensor kinase activity	RCA
GO:0018106	peptidyl-histidine phosphorylation	AnnotationPropagation	P	GO:0000155	phosphorelay sensor kinase activity	RCA
GO:0023014	signal transduction by protein phosphorylation	AnnotationPropagation	P	GO:0000155	phosphorelay sensor kinase activity	RCA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0015036	disulfide oxidoreductase activity	IDA
GO:0006508	proteolysis	AnnotationPropagation	P	GO:0004176	ATP-dependent peptidase activity	ISS
GO:0006468	protein phosphorylation	AnnotationPropagation	P	GO:0004672	protein kinase activity	IDA
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0022804	active transmembrane transporter activity	EXP
GO:0006355	regulation of transcription, DNA-templated	AnnotationPropagation	P	GO:0003700	DNA binding transcription factor activity	IDA
GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic	AnnotationPropagation	P	GO:0004521	endoribonuclease activity	IMP
GO:0016310	phosphorylation	AnnotationPropagation	P	GO:0004072	aspartate kinase activity	IDA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0033745	L-methionine-(R)-S-oxide reductase activity	IDA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0008912	lactaldehyde reductase activity	IDA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0008839	4-hydroxy-tetrahydrodipicolinate reductase	IDA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0004601	peroxidase activity	IDA
GO:0098869	cellular oxidant detoxification	AnnotationPropagation	P	GO:0004601	peroxidase activity	IDA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0008750	NAD(P)+ transhydrogenase (AB-specific) activity	IDA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0046566	DOPA dioxygenase activity	IDA
GO:0022900	electron transport chain	AnnotationPropagation	P	GO:0009055	electron transfer activity	IDA
GO:0005977	glycogen metabolic process	AnnotationPropagation	P	GO:0004133	glycogen debranching enzyme activity	IMP
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0015473	fimbrial usher porin activity	ISS
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0008709	cholate 7-alpha-dehydrogenase activity	IDA
GO:0046835	carbohydrate phosphorylation	AnnotationPropagation	P	GO:0003872	6-phosphofructokinase activity	IDA
GO:0061615	glycolytic process through fructose-6-phosphate	AnnotationPropagation	P	GO:0003872	6-phosphofructokinase activity	IDA
GO:0006259	DNA metabolic process	AnnotationPropagation	P	GO:0051908	double-stranded DNA 5'-3' exodeoxyribonuclease activity	IDA
GO:0090305	nucleic acid phosphodiester bond hydrolysis	AnnotationPropagation	P	GO:0051908	double-stranded DNA 5'-3' exodeoxyribonuclease activity	IDA
GO:0006508	proteolysis	AnnotationPropagation	P	GO:0016805	dipeptidase activity	IMP
GO:0016310	phosphorylation	AnnotationPropagation	P	GO:0004417	hydroxyethylthiazole kinase activity	IDA
GO:0016311	dephosphorylation	AnnotationPropagation	P	GO:0050308	sugar-phosphatase activity	IDA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0004362	glutathione-disulfide reductase activity	IDA
GO:0098869	cellular oxidant detoxification	AnnotationPropagation	P	GO:0004362	glutathione-disulfide reductase activity	IDA
GO:0007165	signal transduction	AnnotationPropagation	P	GO:0004871	signal transducer activity	IMP
GO:0046835	carbohydrate phosphorylation	AnnotationPropagation	P	GO:0009384	N-acylmannosamine kinase activity	IDA
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0015453	oxidoreduction-driven active transmembrane transporter activity	IDA
GO:0016311	dephosphorylation	AnnotationPropagation	P	GO:0016791	phosphatase activity	IDA
GO:0017148	negative regulation of translation	AnnotationPropagation	P	GO:0000900	translation repressor activity, mRNA regulatory element binding	IDA
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0015288	porin activity	IDA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0008753	NADPH dehydrogenase (quinone) activity	IDA
GO:0006310	DNA recombination	AnnotationPropagation	P	GO:0000150	recombinase activity	IMP
GO:0006355	regulation of transcription, DNA-templated	AnnotationPropagation	P	GO:0003700	DNA binding transcription factor activity	IDA
GO:0046836	glycolipid transport	AnnotationPropagation	P	GO:0017089	glycolipid transporter activity	IMP
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0042602	riboflavin reductase (NADPH) activity	IDA
GO:0015914	phospholipid transport	AnnotationPropagation	P	GO:0005548	phospholipid transporter activity	IGI
GO:0032259	methylation	AnnotationPropagation	P	GO:0004047	aminomethyltransferase activity	IDA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0008750	NAD(P)+ transhydrogenase (AB-specific) activity	IDA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0003995	acyl-CoA dehydrogenase activity	IMP
GO:0032508	DNA duplex unwinding	AnnotationPropagation	P	GO:0004003	ATP-dependent DNA helicase activity	IDA
GO:0046835	carbohydrate phosphorylation	AnnotationPropagation	P	GO:0008662	1-phosphofructokinase activity	IDA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0004033	aldo-keto reductase (NADP) activity	NAS
GO:0005622	intracellular	AnnotationPropagation	C	GO:0000160	phosphorelay signal transduction system	IDA
GO:0000160	phosphorelay signal transduction system	AnnotationPropagation	P	GO:0000155	phosphorelay sensor kinase activity	IMP
GO:0018106	peptidyl-histidine phosphorylation	AnnotationPropagation	P	GO:0000155	phosphorelay sensor kinase activity	IMP
GO:0023014	signal transduction by protein phosphorylation	AnnotationPropagation	P	GO:0000155	phosphorelay sensor kinase activity	IMP
GO:0006171	cAMP biosynthetic process	AnnotationPropagation	P	GO:0004016	adenylate cyclase activity	IDA
GO:0000160	phosphorelay signal transduction system	AnnotationPropagation	P	GO:0000155	phosphorelay sensor kinase activity	ISS
GO:0018106	peptidyl-histidine phosphorylation	AnnotationPropagation	P	GO:0000155	phosphorelay sensor kinase activity	ISS
GO:0023014	signal transduction by protein phosphorylation	AnnotationPropagation	P	GO:0000155	phosphorelay sensor kinase activity	ISS
GO:0006355	regulation of transcription, DNA-templated	AnnotationPropagation	P	GO:0003700	DNA binding transcription factor activity	IDA
GO:0000413	protein peptidyl-prolyl isomerization	AnnotationPropagation	P	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IDA
GO:0006355	regulation of transcription, DNA-templated	AnnotationPropagation	P	GO:0003700	DNA binding transcription factor activity	ISS
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0033797	selenate reductase activity	IMP
GO:0015920	lipopolysaccharide transport	AnnotationPropagation	P	GO:0015221	lipopolysaccharide transmembrane transporter activity	IGI
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0015221	lipopolysaccharide transmembrane transporter activity	IGI
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0008137	NADH dehydrogenase (ubiquinone) activity	IMP
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0042279	nitrite reductase (cytochrome, ammonia-forming) activity	IDA
GO:0016311	dephosphorylation	AnnotationPropagation	P	GO:0003993	acid phosphatase activity	IDA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0003938	IMP dehydrogenase activity	IDA
GO:0015768	maltose transport	AnnotationPropagation	P	GO:0015423	maltose-transporting ATPase activity	IDA
GO:0034219	carbohydrate transmembrane transport	AnnotationPropagation	P	GO:0015423	maltose-transporting ATPase activity	IDA
GO:0006259	DNA metabolic process	AnnotationPropagation	P	GO:0004520	endodeoxyribonuclease activity	IDA
GO:0090305	nucleic acid phosphodiester bond hydrolysis	AnnotationPropagation	P	GO:0004520	endodeoxyribonuclease activity	IDA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0033748	hydrogenase (acceptor) activity	IMP
GO:0043086	negative regulation of catalytic activity	AnnotationPropagation	P	GO:0060241	lysozyme inhibitor activity	IDA
GO:0016310	phosphorylation	AnnotationPropagation	P	GO:0050225	pseudouridine kinase activity	ISS
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0004473	malate dehydrogenase (decarboxylating) (NADP+) activity	IMP
GO:0000160	phosphorelay signal transduction system	AnnotationPropagation	P	GO:0000156	phosphorelay response regulator activity	IDA
GO:0006412	translation	AnnotationPropagation	P	GO:0016150	translation release factor activity, codon nonspecific	IDA
GO:0006415	translational termination	AnnotationPropagation	P	GO:0016150	translation release factor activity, codon nonspecific	IDA
GO:0018108	peptidyl-tyrosine phosphorylation	AnnotationPropagation	P	GO:0004713	protein tyrosine kinase activity	IDA
GO:0009103	lipopolysaccharide biosynthetic process	AnnotationPropagation	P	GO:0008919	lipopolysaccharide glucosyltransferase I activity	IMP
GO:0022900	electron transport chain	AnnotationPropagation	P	GO:0009055	electron transfer activity	IMP
GO:0046835	carbohydrate phosphorylation	AnnotationPropagation	P	GO:0045127	N-acetylglucosamine kinase activity	IDA
GO:0000413	protein peptidyl-prolyl isomerization	AnnotationPropagation	P	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IDA
GO:0006508	proteolysis	AnnotationPropagation	P	GO:0016805	dipeptidase activity	IDA
GO:0099131	ATP hydrolysis coupled ion transmembrane transport	AnnotationPropagation	P	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism	IMP
GO:1902600	proton transmembrane transport	AnnotationPropagation	P	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism	IMP
GO:0099132	ATP hydrolysis coupled cation transmembrane transport	AnnotationPropagation	P	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism	IMP
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IDA
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0015288	porin activity	IDA
GO:0007165	signal transduction	AnnotationPropagation	P	GO:0004871	signal transducer activity	IMP
GO:0006355	regulation of transcription, DNA-templated	AnnotationPropagation	P	GO:0003700	DNA binding transcription factor activity	IMP
GO:0030488	tRNA methylation	AnnotationPropagation	P	GO:0016430	tRNA (adenine-N6-)-methyltransferase activity	IDA
GO:0000160	phosphorelay signal transduction system	AnnotationPropagation	P	GO:0000155	phosphorelay sensor kinase activity	IDA
GO:0018106	peptidyl-histidine phosphorylation	AnnotationPropagation	P	GO:0000155	phosphorelay sensor kinase activity	IDA
GO:0023014	signal transduction by protein phosphorylation	AnnotationPropagation	P	GO:0000155	phosphorelay sensor kinase activity	IDA
GO:0006355	regulation of transcription, DNA-templated	AnnotationPropagation	P	GO:0003700	DNA binding transcription factor activity	IDA
GO:0022900	electron transport chain	AnnotationPropagation	P	GO:0009055	electron transfer activity	IDA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0008137	NADH dehydrogenase (ubiquinone) activity	IMP
GO:0032259	methylation	AnnotationPropagation	P	GO:0008825	cyclopropane-fatty-acyl-phospholipid synthase activity	IDA
GO:0000160	phosphorelay signal transduction system	AnnotationPropagation	P	GO:0000155	phosphorelay sensor kinase activity	IDA
GO:0018106	peptidyl-histidine phosphorylation	AnnotationPropagation	P	GO:0000155	phosphorelay sensor kinase activity	IDA
GO:0023014	signal transduction by protein phosphorylation	AnnotationPropagation	P	GO:0000155	phosphorelay sensor kinase activity	IDA
GO:0099131	ATP hydrolysis coupled ion transmembrane transport	AnnotationPropagation	P	GO:0046961	proton-transporting ATPase activity, rotational mechanism	IMP
GO:1902600	proton transmembrane transport	AnnotationPropagation	P	GO:0046961	proton-transporting ATPase activity, rotational mechanism	IMP
GO:0099132	ATP hydrolysis coupled cation transmembrane transport	AnnotationPropagation	P	GO:0046961	proton-transporting ATPase activity, rotational mechanism	IMP
GO:0006508	proteolysis	AnnotationPropagation	P	GO:0008233	peptidase activity	IDA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0004316	3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity	IMP
GO:0009972	cytidine deamination	AnnotationPropagation	P	GO:0004126	cytidine deaminase activity	IDA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0016709	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	IDA
GO:0006508	proteolysis	AnnotationPropagation	P	GO:0008237	metallopeptidase activity	IDA
GO:0006508	proteolysis	AnnotationPropagation	P	GO:0008237	metallopeptidase activity	IDA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0008691	3-hydroxybutyryl-CoA dehydrogenase activity	IDA
GO:0005623	cell	AnnotationPropagation	C	GO:0045454	cell redox homeostasis	IMP
GO:0000160	phosphorelay signal transduction system	AnnotationPropagation	P	GO:0000155	phosphorelay sensor kinase activity	IDA
GO:0018106	peptidyl-histidine phosphorylation	AnnotationPropagation	P	GO:0000155	phosphorelay sensor kinase activity	IDA
GO:0023014	signal transduction by protein phosphorylation	AnnotationPropagation	P	GO:0000155	phosphorelay sensor kinase activity	IDA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0004159	dihydrouracil dehydrogenase (NAD+) activity	ISS
GO:1903506	regulation of nucleic acid-templated transcription	AnnotationPropagation	P	GO:0016989	sigma factor antagonist activity	IMP
GO:0031167	rRNA methylation	AnnotationPropagation	P	GO:0009383	rRNA (cytosine-C5-)-methyltransferase activity	IDA
GO:0006259	DNA metabolic process	AnnotationPropagation	P	GO:0004520	endodeoxyribonuclease activity	IDA
GO:0090305	nucleic acid phosphodiester bond hydrolysis	AnnotationPropagation	P	GO:0004520	endodeoxyribonuclease activity	IDA
GO:0035434	copper ion transmembrane transport	AnnotationPropagation	P	GO:0005375	copper ion transmembrane transporter activity	IGI
GO:0000413	protein peptidyl-prolyl isomerization	AnnotationPropagation	P	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IDA
GO:1903785	L-valine transmembrane transport	AnnotationPropagation	P	GO:0005304	L-valine transmembrane transporter activity	IMP
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0050131	N-methyl-L-amino-acid oxidase activity	IDA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0004022	alcohol dehydrogenase (NAD) activity	IMP
GO:0043086	negative regulation of catalytic activity	AnnotationPropagation	P	GO:0004857	enzyme inhibitor activity	RCA
GO:0030488	tRNA methylation	AnnotationPropagation	P	GO:0052665	tRNA (uracil-2'-O-)-methyltransferase activity	IMP
GO:1903507	negative regulation of nucleic acid-templated transcription	AnnotationPropagation	P	GO:0003714	transcription corepressor activity	IDA
GO:0099131	ATP hydrolysis coupled ion transmembrane transport	AnnotationPropagation	P	GO:0015413	nickel-transporting ATPase activity	ISS
GO:0099132	ATP hydrolysis coupled cation transmembrane transport	AnnotationPropagation	P	GO:0015413	nickel-transporting ATPase activity	ISS
GO:0072511	divalent inorganic cation transport	AnnotationPropagation	P	GO:0015413	nickel-transporting ATPase activity	ISS
GO:0035444	nickel cation transmembrane transport	AnnotationPropagation	P	GO:0015413	nickel-transporting ATPase activity	ISS
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0015035	protein disulfide oxidoreductase activity	IDA
GO:0090503	RNA phosphodiester bond hydrolysis, exonucleolytic	AnnotationPropagation	P	GO:0000175	3'-5'-exoribonuclease activity	IDA
GO:0046835	carbohydrate phosphorylation	AnnotationPropagation	P	GO:0008993	rhamnulokinase activity	IDA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0008137	NADH dehydrogenase (ubiquinone) activity	IMP
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0008720	D-lactate dehydrogenase activity	IDA
GO:0032259	methylation	AnnotationPropagation	P	GO:0008898	S-adenosylmethionine-homocysteine S-methyltransferase activity	IDA
GO:0006412	translation	AnnotationPropagation	P	GO:0003746	translation elongation factor activity	IDA
GO:0006414	translational elongation	AnnotationPropagation	P	GO:0003746	translation elongation factor activity	IDA
GO:0000160	phosphorelay signal transduction system	AnnotationPropagation	P	GO:0000155	phosphorelay sensor kinase activity	IMP
GO:0018106	peptidyl-histidine phosphorylation	AnnotationPropagation	P	GO:0000155	phosphorelay sensor kinase activity	IMP
GO:0023014	signal transduction by protein phosphorylation	AnnotationPropagation	P	GO:0000155	phosphorelay sensor kinase activity	IMP
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0008743	L-threonine 3-dehydrogenase activity	IDA
GO:0016310	phosphorylation	AnnotationPropagation	P	GO:0019165	thiamine kinase activity	IMP
GO:0016311	dephosphorylation	AnnotationPropagation	P	GO:0050483	IMP 5'-nucleotidase activity	IDA
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0015293	symporter activity	IDA
GO:0006591	ornithine metabolic process	AnnotationPropagation	P	GO:0004585	ornithine carbamoyltransferase activity	IDA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0008762	UDP-N-acetylmuramate dehydrogenase activity	IDA
GO:0016311	dephosphorylation	AnnotationPropagation	P	GO:0008254	3'-nucleotidase activity	IDA
GO:0006508	proteolysis	AnnotationPropagation	P	GO:0008233	peptidase activity	IDA
GO:0016311	dephosphorylation	AnnotationPropagation	P	GO:0008253	5'-nucleotidase activity	IDA
GO:0022900	electron transport chain	AnnotationPropagation	P	GO:0009055	electron transfer activity	IDA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0004375	glycine dehydrogenase (decarboxylating) activity	IDA
GO:0016311	dephosphorylation	AnnotationPropagation	P	GO:0008253	5'-nucleotidase activity	IDA
GO:0016311	dephosphorylation	AnnotationPropagation	P	GO:0016158	3-phytase activity	IDA
GO:0010951	negative regulation of endopeptidase activity	AnnotationPropagation	P	GO:0004867	serine-type endopeptidase inhibitor activity	IDA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0016655	oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	IDA
GO:0031167	rRNA methylation	AnnotationPropagation	P	GO:0008990	rRNA (guanine-N2-)-methyltransferase activity	IDA
GO:0006508	proteolysis	AnnotationPropagation	P	GO:0004222	metalloendopeptidase activity	IDA
GO:0005623	cell	AnnotationPropagation	C	GO:0030007	cellular potassium ion homeostasis	IGI
GO:0006259	DNA metabolic process	AnnotationPropagation	P	GO:1990238	double-stranded DNA endodeoxyribonuclease activity	IDA
GO:0090305	nucleic acid phosphodiester bond hydrolysis	AnnotationPropagation	P	GO:1990238	double-stranded DNA endodeoxyribonuclease activity	IDA
GO:0031167	rRNA methylation	AnnotationPropagation	P	GO:0008989	rRNA (guanine-N1-)-methyltransferase activity	IDA
GO:0022900	electron transport chain	AnnotationPropagation	P	GO:0009055	electron transfer activity	IDA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0004459	L-lactate dehydrogenase activity	IGI
GO:0006508	proteolysis	AnnotationPropagation	P	GO:0008233	peptidase activity	IDA
GO:0022900	electron transport chain	AnnotationPropagation	P	GO:0009055	electron transfer activity	IDA
GO:0005623	cell	AnnotationPropagation	C	GO:0009992	cellular water homeostasis	IMP
GO:0015837	amine transport	AnnotationPropagation	P	GO:0015426	polar-amino acid-transporting ATPase activity	ISM
GO:0003333	amino acid transmembrane transport	AnnotationPropagation	P	GO:0015426	polar-amino acid-transporting ATPase activity	ISM
GO:0006259	DNA metabolic process	AnnotationPropagation	P	GO:0004520	endodeoxyribonuclease activity	IDA
GO:0090305	nucleic acid phosphodiester bond hydrolysis	AnnotationPropagation	P	GO:0004520	endodeoxyribonuclease activity	IDA
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0015453	oxidoreduction-driven active transmembrane transporter activity	IDA
GO:0016310	phosphorylation	AnnotationPropagation	P	GO:0047324	phosphoenolpyruvate-glycerone phosphotransferase activity	IMP
GO:1902600	proton transmembrane transport	AnnotationPropagation	P	GO:0015649	2-keto-3-deoxygluconate:proton symporter activity	IDA
GO:0046411	2-keto-3-deoxygluconate transmembrane transport	AnnotationPropagation	P	GO:0015649	2-keto-3-deoxygluconate:proton symporter activity	IDA
GO:0022900	electron transport chain	AnnotationPropagation	P	GO:0009055	electron transfer activity	IDA
GO:0005623	cell	AnnotationPropagation	C	GO:0051454	intracellular pH elevation	IMP
GO:0035434	copper ion transmembrane transport	AnnotationPropagation	P	GO:0005375	copper ion transmembrane transporter activity	IGI
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0004033	aldo-keto reductase (NADP) activity	IDA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0004033	aldo-keto reductase (NADP) activity	IDA