GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0004497	monooxygenase activity	IBA
GO:0018117	protein adenylylation	AnnotationPropagation	P	GO:0070733	protein adenylyltransferase activity	IBA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0047134	protein-disulfide reductase activity	IBA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0003959	NADPH dehydrogenase activity	IBA
GO:0006508	proteolysis	AnnotationPropagation	P	GO:0004190	aspartic-type endopeptidase activity	IBA
GO:0005623	cell	AnnotationPropagation	C	GO:0010992	ubiquitin recycling	IBA
GO:0032508	DNA duplex unwinding	AnnotationPropagation	P	GO:0004003	ATP-dependent DNA helicase activity	ISS
GO:0005622	intracellular	AnnotationPropagation	C	GO:0006406	mRNA export from nucleus	IBA
GO:0005623	cell	AnnotationPropagation	C	GO:0006406	mRNA export from nucleus	IBA
GO:0006457	protein folding	AnnotationPropagation	P	GO:0044183	protein binding involved in protein folding	IBA
GO:0032259	methylation	AnnotationPropagation	P	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	IBA
GO:0032259	methylation	AnnotationPropagation	P	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	IBA
GO:0043085	positive regulation of catalytic activity	AnnotationPropagation	P	GO:0008047	enzyme activator activity	IBA
GO:0006508	proteolysis	AnnotationPropagation	P	GO:0004197	cysteine-type endopeptidase activity	IBA
GO:0032259	methylation	AnnotationPropagation	P	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	IBA
GO:0031167	rRNA methylation	AnnotationPropagation	P	GO:0070042	rRNA (uridine-N3-)-methyltransferase activity	IBA
GO:0006357	regulation of transcription by RNA polymerase II	AnnotationPropagation	P	GO:0001076	transcription factor activity, RNA polymerase II transcription factor binding	IBA
GO:0006508	proteolysis	AnnotationPropagation	P	GO:0004197	cysteine-type endopeptidase activity	IBA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0051213	dioxygenase activity	IBA
GO:0016311	dephosphorylation	AnnotationPropagation	P	GO:0008195	phosphatidate phosphatase activity	IBA
GO:0043085	positive regulation of catalytic activity	AnnotationPropagation	P	GO:0008047	enzyme activator activity	IBA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IBA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0030586	[methionine synthase] reductase activity	IBA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0016491	oxidoreductase activity	IBA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0003995	acyl-CoA dehydrogenase activity	IBA
GO:0005622	intracellular	AnnotationPropagation	C	GO:0007264	small GTPase mediated signal transduction	IBA
GO:0034414	tRNA 3'-trailer cleavage, endonucleolytic	AnnotationPropagation	P	GO:0042781	3'-tRNA processing endoribonuclease activity	IBA
GO:0006355	regulation of transcription, DNA-templated	AnnotationPropagation	P	GO:0003700	DNA binding transcription factor activity	IDA
GO:0005622	intracellular	AnnotationPropagation	C	GO:0006406	mRNA export from nucleus	IBA
GO:0005623	cell	AnnotationPropagation	C	GO:0006406	mRNA export from nucleus	IBA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0003959	NADPH dehydrogenase activity	IBA
GO:0090305	nucleic acid phosphodiester bond hydrolysis	AnnotationPropagation	P	GO:0004519	endonuclease activity	IBA
GO:0016311	dephosphorylation	AnnotationPropagation	P	GO:0050278	sedoheptulose-bisphosphatase activity	IBA
GO:0090305	nucleic acid phosphodiester bond hydrolysis	AnnotationPropagation	P	GO:0008408	3'-5' exonuclease activity	IBA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0030586	[methionine synthase] reductase activity	IBA
GO:0032259	methylation	AnnotationPropagation	P	GO:0003908	methylated-DNA-[protein]-cysteine S-methyltransferase activity	IBA
GO:0090503	RNA phosphodiester bond hydrolysis, exonucleolytic	AnnotationPropagation	P	GO:0000175	3'-5'-exoribonuclease activity	IBA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0003995	acyl-CoA dehydrogenase activity	IBA
GO:0016311	dephosphorylation	AnnotationPropagation	P	GO:0052745	inositol phosphate phosphatase activity	IBA
GO:0006508	proteolysis	AnnotationPropagation	P	GO:0004222	metalloendopeptidase activity	IBA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IBA
GO:0006259	DNA metabolic process	AnnotationPropagation	P	GO:0004531	deoxyribonuclease II activity	IBA
GO:0090305	nucleic acid phosphodiester bond hydrolysis	AnnotationPropagation	P	GO:0004531	deoxyribonuclease II activity	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0032543	mitochondrial translation	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0070900	mitochondrial tRNA modification	IDA
GO:0005622	intracellular	AnnotationPropagation	C	GO:0006606	protein import into nucleus	IBA
GO:0005623	cell	AnnotationPropagation	C	GO:0006606	protein import into nucleus	IBA
GO:0006508	proteolysis	AnnotationPropagation	P	GO:0004843	thiol-dependent ubiquitin-specific protease activity	IBA
GO:0005622	intracellular	AnnotationPropagation	C	GO:0047496	vesicle transport along microtubule	IBA
GO:0005623	cell	AnnotationPropagation	C	GO:0047496	vesicle transport along microtubule	IBA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0052873	FMN reductase (NADPH) activity	IBA
GO:0032259	methylation	AnnotationPropagation	P	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	IBA
GO:0006259	DNA metabolic process	AnnotationPropagation	P	GO:0004536	deoxyribonuclease activity	IBA
GO:0090305	nucleic acid phosphodiester bond hydrolysis	AnnotationPropagation	P	GO:0004536	deoxyribonuclease activity	IBA
GO:0005622	intracellular	AnnotationPropagation	C	GO:0045041	protein import into mitochondrial intermembrane space	IBA
GO:0005623	cell	AnnotationPropagation	C	GO:0045041	protein import into mitochondrial intermembrane space	IBA
GO:0090503	RNA phosphodiester bond hydrolysis, exonucleolytic	AnnotationPropagation	P	GO:0000175	3'-5'-exoribonuclease activity	IBA
GO:0032259	methylation	AnnotationPropagation	P	GO:0008168	methyltransferase activity	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0072684	mitochondrial tRNA 3'-trailer cleavage, endonucleolytic	IBA
GO:0032259	methylation	AnnotationPropagation	P	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	IBA
GO:0006259	DNA metabolic process	AnnotationPropagation	P	GO:0004531	deoxyribonuclease II activity	IBA
GO:0090305	nucleic acid phosphodiester bond hydrolysis	AnnotationPropagation	P	GO:0004531	deoxyribonuclease II activity	IBA
GO:0005622	intracellular	AnnotationPropagation	C	GO:0006895	Golgi to endosome transport	IBA
GO:0005623	cell	AnnotationPropagation	C	GO:0006895	Golgi to endosome transport	IBA
GO:0005829	cytosol	AnnotationPropagation	C	GO:0006895	Golgi to endosome transport	IBA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0051213	dioxygenase activity	IBA
GO:0005622	intracellular	AnnotationPropagation	C	GO:0032365	intracellular lipid transport	IBA
GO:0005623	cell	AnnotationPropagation	C	GO:0032365	intracellular lipid transport	IBA
GO:0032259	methylation	AnnotationPropagation	P	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	IBA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0003995	acyl-CoA dehydrogenase activity	IBA
GO:0006508	proteolysis	AnnotationPropagation	P	GO:0004197	cysteine-type endopeptidase activity	IBA
GO:0032259	methylation	AnnotationPropagation	P	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	IBA
GO:0046854	phosphatidylinositol phosphorylation	AnnotationPropagation	P	GO:0016308	1-phosphatidylinositol-4-phosphate 5-kinase activity	IDA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0004458	D-lactate dehydrogenase (cytochrome) activity	ISS
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0004146	dihydrofolate reductase activity	IDA
GO:0032259	methylation	AnnotationPropagation	P	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	IBA
GO:0043085	positive regulation of catalytic activity	AnnotationPropagation	P	GO:0008047	enzyme activator activity	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0072684	mitochondrial tRNA 3'-trailer cleavage, endonucleolytic	IBA
GO:0005622	intracellular	AnnotationPropagation	C	GO:0006406	mRNA export from nucleus	IBA
GO:0005623	cell	AnnotationPropagation	C	GO:0006406	mRNA export from nucleus	IBA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0017150	tRNA dihydrouridine synthase activity	IBA
GO:0002943	tRNA dihydrouridine synthesis	AnnotationPropagation	P	GO:0017150	tRNA dihydrouridine synthase activity	IBA
GO:0043085	positive regulation of catalytic activity	AnnotationPropagation	P	GO:0008047	enzyme activator activity	IBA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0004497	monooxygenase activity	IBA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0017150	tRNA dihydrouridine synthase activity	IBA
GO:0002943	tRNA dihydrouridine synthesis	AnnotationPropagation	P	GO:0017150	tRNA dihydrouridine synthase activity	IBA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0017150	tRNA dihydrouridine synthase activity	IBA
GO:0002943	tRNA dihydrouridine synthesis	AnnotationPropagation	P	GO:0017150	tRNA dihydrouridine synthase activity	IBA
GO:0032259	methylation	AnnotationPropagation	P	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	IBA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0004497	monooxygenase activity	IBA
GO:0006259	DNA metabolic process	AnnotationPropagation	P	GO:0004531	deoxyribonuclease II activity	IBA
GO:0090305	nucleic acid phosphodiester bond hydrolysis	AnnotationPropagation	P	GO:0004531	deoxyribonuclease II activity	IBA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0003959	NADPH dehydrogenase activity	IBA
GO:0005622	intracellular	AnnotationPropagation	C	GO:0016197	endosomal transport	IBA
GO:0005623	cell	AnnotationPropagation	C	GO:0016197	endosomal transport	IBA
GO:0005622	intracellular	AnnotationPropagation	C	GO:0045041	protein import into mitochondrial intermembrane space	IBA
GO:0005623	cell	AnnotationPropagation	C	GO:0045041	protein import into mitochondrial intermembrane space	IBA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0003995	acyl-CoA dehydrogenase activity	IBA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0051213	dioxygenase activity	IBA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0004155	6,7-dihydropteridine reductase activity	IDA
GO:0000451	rRNA 2'-O-methylation	AnnotationPropagation	P	GO:0070039	rRNA (guanosine-2'-O-)-methyltransferase activity	IBA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0003995	acyl-CoA dehydrogenase activity	IBA
GO:0016311	dephosphorylation	AnnotationPropagation	P	GO:0008195	phosphatidate phosphatase activity	IBA
GO:0005622	intracellular	AnnotationPropagation	C	GO:0006606	protein import into nucleus	IBA
GO:0005623	cell	AnnotationPropagation	C	GO:0006606	protein import into nucleus	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0032543	mitochondrial translation	IBA
GO:0005622	intracellular	AnnotationPropagation	C	GO:0006406	mRNA export from nucleus	IBA
GO:0005623	cell	AnnotationPropagation	C	GO:0006406	mRNA export from nucleus	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0072684	mitochondrial tRNA 3'-trailer cleavage, endonucleolytic	IBA
GO:0090305	nucleic acid phosphodiester bond hydrolysis	AnnotationPropagation	P	GO:0008409	5'-3' exonuclease activity	IBA
GO:0006508	proteolysis	AnnotationPropagation	P	GO:0008239	dipeptidyl-peptidase activity	IBA
GO:0006508	proteolysis	AnnotationPropagation	P	GO:0004197	cysteine-type endopeptidase activity	IBA
GO:0005622	intracellular	AnnotationPropagation	C	GO:0006406	mRNA export from nucleus	IBA
GO:0005623	cell	AnnotationPropagation	C	GO:0006406	mRNA export from nucleus	IBA
GO:0006508	proteolysis	AnnotationPropagation	P	GO:0070573	metallodipeptidase activity	IBA
GO:0090503	RNA phosphodiester bond hydrolysis, exonucleolytic	AnnotationPropagation	P	GO:0000175	3'-5'-exoribonuclease activity	IBA
GO:0043085	positive regulation of catalytic activity	AnnotationPropagation	P	GO:0008047	enzyme activator activity	IBA
GO:0006508	proteolysis	AnnotationPropagation	P	GO:0004190	aspartic-type endopeptidase activity	IBA
GO:0032259	methylation	AnnotationPropagation	P	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0070124	mitochondrial translational initiation	IBA
GO:0032259	methylation	AnnotationPropagation	P	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	IBA
GO:0006468	protein phosphorylation	AnnotationPropagation	P	GO:0004672	protein kinase activity	IDA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0003959	NADPH dehydrogenase activity	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0032543	mitochondrial translation	IBA
GO:0006508	proteolysis	AnnotationPropagation	P	GO:0008239	dipeptidyl-peptidase activity	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0070126	mitochondrial translational termination	IBA
GO:0032259	methylation	AnnotationPropagation	P	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	IBA
GO:0005622	intracellular	AnnotationPropagation	C	GO:0006406	mRNA export from nucleus	IBA
GO:0005623	cell	AnnotationPropagation	C	GO:0006406	mRNA export from nucleus	IBA
GO:0006259	DNA metabolic process	AnnotationPropagation	P	GO:0004531	deoxyribonuclease II activity	IBA
GO:0090305	nucleic acid phosphodiester bond hydrolysis	AnnotationPropagation	P	GO:0004531	deoxyribonuclease II activity	IBA
GO:0043085	positive regulation of catalytic activity	AnnotationPropagation	P	GO:0008047	enzyme activator activity	IBA
GO:0043085	positive regulation of catalytic activity	AnnotationPropagation	P	GO:0008047	enzyme activator activity	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0070126	mitochondrial translational termination	IBA
GO:0000413	protein peptidyl-prolyl isomerization	AnnotationPropagation	P	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IBA
GO:0006508	proteolysis	AnnotationPropagation	P	GO:0004197	cysteine-type endopeptidase activity	IBA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0008137	NADH dehydrogenase (ubiquinone) activity	ISS
GO:0016310	phosphorylation	AnnotationPropagation	P	GO:0004143	diacylglycerol kinase activity	IDA
GO:0006259	DNA metabolic process	AnnotationPropagation	P	GO:0004536	deoxyribonuclease activity	IBA
GO:0090305	nucleic acid phosphodiester bond hydrolysis	AnnotationPropagation	P	GO:0004536	deoxyribonuclease activity	IBA
GO:0006508	proteolysis	AnnotationPropagation	P	GO:0004197	cysteine-type endopeptidase activity	IBA
GO:0016311	dephosphorylation	AnnotationPropagation	P	GO:0008253	5'-nucleotidase activity	IBA
GO:0043085	positive regulation of catalytic activity	AnnotationPropagation	P	GO:0008047	enzyme activator activity	IBA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0016491	oxidoreductase activity	IBA
GO:0043085	positive regulation of catalytic activity	AnnotationPropagation	P	GO:0008047	enzyme activator activity	IBA
GO:0006508	proteolysis	AnnotationPropagation	P	GO:0004197	cysteine-type endopeptidase activity	IBA
GO:0006508	proteolysis	AnnotationPropagation	P	GO:0004252	serine-type endopeptidase activity	IBA
GO:0000413	protein peptidyl-prolyl isomerization	AnnotationPropagation	P	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IBA
GO:0043085	positive regulation of catalytic activity	AnnotationPropagation	P	GO:0008047	enzyme activator activity	IBA
GO:0005622	intracellular	AnnotationPropagation	C	GO:0006606	protein import into nucleus	IBA
GO:0005623	cell	AnnotationPropagation	C	GO:0006606	protein import into nucleus	IBA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0004497	monooxygenase activity	IBA
GO:0006508	proteolysis	AnnotationPropagation	P	GO:0008239	dipeptidyl-peptidase activity	IBA
GO:0032508	DNA duplex unwinding	AnnotationPropagation	P	GO:0009378	four-way junction helicase activity	IBA
GO:0005622	intracellular	AnnotationPropagation	C	GO:0006606	protein import into nucleus	IBA
GO:0005623	cell	AnnotationPropagation	C	GO:0006606	protein import into nucleus	IBA
GO:0006259	DNA metabolic process	AnnotationPropagation	P	GO:0004531	deoxyribonuclease II activity	IBA
GO:0090305	nucleic acid phosphodiester bond hydrolysis	AnnotationPropagation	P	GO:0004531	deoxyribonuclease II activity	IBA
GO:0006508	proteolysis	AnnotationPropagation	P	GO:0004252	serine-type endopeptidase activity	IBA
GO:0005622	intracellular	AnnotationPropagation	C	GO:0030970	retrograde protein transport, ER to cytosol	IBA
GO:0005623	cell	AnnotationPropagation	C	GO:0030970	retrograde protein transport, ER to cytosol	IBA
GO:0005737	cytoplasm	AnnotationPropagation	C	GO:0030970	retrograde protein transport, ER to cytosol	IBA
GO:0031167	rRNA methylation	AnnotationPropagation	P	GO:0008649	rRNA methyltransferase activity	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0070126	mitochondrial translational termination	IBA
GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic	AnnotationPropagation	P	GO:0004525	ribonuclease III activity	IBA
GO:0016311	dephosphorylation	AnnotationPropagation	P	GO:0004438	phosphatidylinositol-3-phosphatase activity	IBA
GO:0018117	protein adenylylation	AnnotationPropagation	P	GO:0070733	protein adenylyltransferase activity	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0033617	mitochondrial respiratory chain complex IV assembly	ISS
GO:0006508	proteolysis	AnnotationPropagation	P	GO:0004190	aspartic-type endopeptidase activity	IBA
GO:0000413	protein peptidyl-prolyl isomerization	AnnotationPropagation	P	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	ISS
GO:0032259	methylation	AnnotationPropagation	P	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	IBA
GO:0006508	proteolysis	AnnotationPropagation	P	GO:0004222	metalloendopeptidase activity	IBA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0003995	acyl-CoA dehydrogenase activity	IBA
GO:0032508	DNA duplex unwinding	AnnotationPropagation	P	GO:0043139	5'-3' DNA helicase activity	ISS
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0033615	mitochondrial proton-transporting ATP synthase complex assembly	IBA
GO:0006508	proteolysis	AnnotationPropagation	P	GO:0004252	serine-type endopeptidase activity	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0032543	mitochondrial translation	IBA
GO:0031167	rRNA methylation	AnnotationPropagation	P	GO:0009383	rRNA (cytosine-C5-)-methyltransferase activity	IBA
GO:0006259	DNA metabolic process	AnnotationPropagation	P	GO:0004531	deoxyribonuclease II activity	IBA
GO:0090305	nucleic acid phosphodiester bond hydrolysis	AnnotationPropagation	P	GO:0004531	deoxyribonuclease II activity	IBA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0047134	protein-disulfide reductase activity	IBA
GO:0046854	phosphatidylinositol phosphorylation	AnnotationPropagation	P	GO:0016307	phosphatidylinositol phosphate kinase activity	ISS
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0003995	acyl-CoA dehydrogenase activity	IBA
GO:0032259	methylation	AnnotationPropagation	P	GO:0003871	5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity	IBA
GO:0016311	dephosphorylation	AnnotationPropagation	P	GO:0050278	sedoheptulose-bisphosphatase activity	IBA
GO:0032259	methylation	AnnotationPropagation	P	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	IBA
GO:0046835	carbohydrate phosphorylation	AnnotationPropagation	P	GO:0003872	6-phosphofructokinase activity	IDA
GO:0061615	glycolytic process through fructose-6-phosphate	AnnotationPropagation	P	GO:0003872	6-phosphofructokinase activity	IDA
GO:0006508	proteolysis	AnnotationPropagation	P	GO:0004190	aspartic-type endopeptidase activity	IBA
GO:0030488	tRNA methylation	AnnotationPropagation	P	GO:0016428	tRNA (cytosine-5-)-methyltransferase activity	IDA
GO:0006355	regulation of transcription, DNA-templated	AnnotationPropagation	P	GO:0003700	DNA binding transcription factor activity	IBA
GO:0006508	proteolysis	AnnotationPropagation	P	GO:0004197	cysteine-type endopeptidase activity	IBA
GO:0043547	positive regulation of GTPase activity	AnnotationPropagation	P	GO:0005096	GTPase activator activity	IMP
GO:0031167	rRNA methylation	AnnotationPropagation	P	GO:0071424	rRNA (cytosine-N4-)-methyltransferase activity	IBA
GO:0016310	phosphorylation	AnnotationPropagation	P	GO:0016301	kinase activity	IBA
GO:0000413	protein peptidyl-prolyl isomerization	AnnotationPropagation	P	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IBA
GO:0016311	dephosphorylation	AnnotationPropagation	P	GO:0050278	sedoheptulose-bisphosphatase activity	IBA
GO:0006508	proteolysis	AnnotationPropagation	P	GO:0004197	cysteine-type endopeptidase activity	IBA
GO:0006259	DNA metabolic process	AnnotationPropagation	P	GO:0004536	deoxyribonuclease activity	IBA
GO:0090305	nucleic acid phosphodiester bond hydrolysis	AnnotationPropagation	P	GO:0004536	deoxyribonuclease activity	IBA
GO:0043085	positive regulation of catalytic activity	AnnotationPropagation	P	GO:0008047	enzyme activator activity	IBA
GO:0043085	positive regulation of catalytic activity	AnnotationPropagation	P	GO:0016176	superoxide-generating NADPH oxidase activator activity	ISS
GO:0006457	protein folding	AnnotationPropagation	P	GO:0044183	protein binding involved in protein folding	IBA
GO:0006508	proteolysis	AnnotationPropagation	P	GO:0004190	aspartic-type endopeptidase activity	IBA
GO:0005623	cell	AnnotationPropagation	C	GO:0048388	endosomal lumen acidification	IMP
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0000965	mitochondrial RNA 3'-end processing	IBA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0003995	acyl-CoA dehydrogenase activity	IBA
GO:0032259	methylation	AnnotationPropagation	P	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	IBA
GO:0106074	aminoacyl-tRNA metabolism involved in translational fidelity	AnnotationPropagation	P	GO:0002196	Ser-tRNA(Ala) hydrolase activity	IBA
GO:0006508	proteolysis	AnnotationPropagation	P	GO:0004197	cysteine-type endopeptidase activity	IBA
GO:0006508	proteolysis	AnnotationPropagation	P	GO:0004222	metalloendopeptidase activity	IBA
GO:0032259	methylation	AnnotationPropagation	P	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	IBA
GO:0030488	tRNA methylation	AnnotationPropagation	P	GO:0004809	tRNA (guanine-N2-)-methyltransferase activity	IBA
GO:0005622	intracellular	AnnotationPropagation	C	GO:0016197	endosomal transport	IBA
GO:0005623	cell	AnnotationPropagation	C	GO:0016197	endosomal transport	IBA
GO:0006508	proteolysis	AnnotationPropagation	P	GO:0008239	dipeptidyl-peptidase activity	IBA
GO:0043085	positive regulation of catalytic activity	AnnotationPropagation	P	GO:0008047	enzyme activator activity	IBA
GO:0005622	intracellular	AnnotationPropagation	C	GO:0000056	ribosomal small subunit export from nucleus	IBA
GO:0005623	cell	AnnotationPropagation	C	GO:0000056	ribosomal small subunit export from nucleus	IBA
GO:0090305	nucleic acid phosphodiester bond hydrolysis	AnnotationPropagation	P	GO:0004519	endonuclease activity	IBA
GO:0032259	methylation	AnnotationPropagation	P	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	IBA
GO:0031167	rRNA methylation	AnnotationPropagation	P	GO:0070042	rRNA (uridine-N3-)-methyltransferase activity	IBA
GO:0090503	RNA phosphodiester bond hydrolysis, exonucleolytic	AnnotationPropagation	P	GO:0000175	3'-5'-exoribonuclease activity	IBA
GO:0006508	proteolysis	AnnotationPropagation	P	GO:0008239	dipeptidyl-peptidase activity	IBA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0004497	monooxygenase activity	IBA
GO:0032259	methylation	AnnotationPropagation	P	GO:0008168	methyltransferase activity	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0033615	mitochondrial proton-transporting ATP synthase complex assembly	IBA
GO:0043085	positive regulation of catalytic activity	AnnotationPropagation	P	GO:0008047	enzyme activator activity	IBA
GO:0032259	methylation	AnnotationPropagation	P	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	IBA
GO:0005622	intracellular	AnnotationPropagation	C	GO:0045040	protein import into mitochondrial outer membrane	TAS
GO:0005623	cell	AnnotationPropagation	C	GO:0045040	protein import into mitochondrial outer membrane	TAS
GO:0005737	cytoplasm	AnnotationPropagation	C	GO:0045040	protein import into mitochondrial outer membrane	TAS
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0045040	protein import into mitochondrial outer membrane	TAS
GO:0006259	DNA metabolic process	AnnotationPropagation	P	GO:0004536	deoxyribonuclease activity	IBA
GO:0090305	nucleic acid phosphodiester bond hydrolysis	AnnotationPropagation	P	GO:0004536	deoxyribonuclease activity	IBA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0016491	oxidoreductase activity	IBA
GO:0090503	RNA phosphodiester bond hydrolysis, exonucleolytic	AnnotationPropagation	P	GO:0000175	3'-5'-exoribonuclease activity	IBA
GO:0006508	proteolysis	AnnotationPropagation	P	GO:0004198	calcium-dependent cysteine-type endopeptidase activity	IDA
GO:0006470	protein dephosphorylation	AnnotationPropagation	P	GO:0004721	phosphoprotein phosphatase activity	IBA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0003959	NADPH dehydrogenase activity	IBA
GO:0032259	methylation	AnnotationPropagation	P	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	IBA
GO:0006470	protein dephosphorylation	AnnotationPropagation	P	GO:0004721	phosphoprotein phosphatase activity	IBA
GO:0010952	positive regulation of peptidase activity	AnnotationPropagation	P	GO:0016504	peptidase activator activity	IBA
GO:0032259	methylation	AnnotationPropagation	P	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	IBA
GO:0005622	intracellular	AnnotationPropagation	C	GO:0045040	protein import into mitochondrial outer membrane	TAS
GO:0005623	cell	AnnotationPropagation	C	GO:0045040	protein import into mitochondrial outer membrane	TAS
GO:0005737	cytoplasm	AnnotationPropagation	C	GO:0045040	protein import into mitochondrial outer membrane	TAS
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0045040	protein import into mitochondrial outer membrane	TAS
GO:0006508	proteolysis	AnnotationPropagation	P	GO:0008239	dipeptidyl-peptidase activity	IBA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0047134	protein-disulfide reductase activity	IBA
GO:0005622	intracellular	AnnotationPropagation	C	GO:0032482	Rab protein signal transduction	IMP
GO:0016311	dephosphorylation	AnnotationPropagation	P	GO:0051800	phosphatidylinositol-3,4-bisphosphate 3-phosphatase activity	IDA
GO:0006508	proteolysis	AnnotationPropagation	P	GO:0004197	cysteine-type endopeptidase activity	IBA
GO:0006508	proteolysis	AnnotationPropagation	P	GO:0070573	metallodipeptidase activity	IBA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0003959	NADPH dehydrogenase activity	IBA
GO:0005622	intracellular	AnnotationPropagation	C	GO:0042147	retrograde transport, endosome to Golgi	IBA
GO:0005623	cell	AnnotationPropagation	C	GO:0042147	retrograde transport, endosome to Golgi	IBA
GO:0005829	cytosol	AnnotationPropagation	C	GO:0042147	retrograde transport, endosome to Golgi	IBA
GO:0006508	proteolysis	AnnotationPropagation	P	GO:0071567	UFM1 hydrolase activity	IBA
GO:0016567	protein ubiquitination	AnnotationPropagation	P	GO:0004839	ubiquitin activating enzyme activity	IBA
GO:0032259	methylation	AnnotationPropagation	P	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	IBA
GO:0032259	methylation	AnnotationPropagation	P	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	IBA
GO:0006508	proteolysis	AnnotationPropagation	P	GO:0004175	endopeptidase activity	IBA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0016706	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	IBA
GO:0006470	protein dephosphorylation	AnnotationPropagation	P	GO:0004722	protein serine/threonine phosphatase activity	IDA
GO:0005622	intracellular	AnnotationPropagation	C	GO:0014065	phosphatidylinositol 3-kinase signaling	IBA
GO:0005622	intracellular	AnnotationPropagation	C	GO:0000060	protein import into nucleus, translocation	IBA
GO:0005623	cell	AnnotationPropagation	C	GO:0000060	protein import into nucleus, translocation	IBA
GO:0032259	methylation	AnnotationPropagation	P	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	IBA
GO:0030488	tRNA methylation	AnnotationPropagation	P	GO:0016300	tRNA (uracil) methyltransferase activity	IBA
GO:0006259	DNA metabolic process	AnnotationPropagation	P	GO:0004531	deoxyribonuclease II activity	IBA
GO:0090305	nucleic acid phosphodiester bond hydrolysis	AnnotationPropagation	P	GO:0004531	deoxyribonuclease II activity	IBA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0047134	protein-disulfide reductase activity	IBA
GO:0016311	dephosphorylation	AnnotationPropagation	P	GO:0016791	phosphatase activity	IBA
GO:0005622	intracellular	AnnotationPropagation	C	GO:0006406	mRNA export from nucleus	IBA
GO:0005623	cell	AnnotationPropagation	C	GO:0006406	mRNA export from nucleus	IBA
GO:0043085	positive regulation of catalytic activity	AnnotationPropagation	P	GO:0008047	enzyme activator activity	IBA
GO:0006508	proteolysis	AnnotationPropagation	P	GO:0008239	dipeptidyl-peptidase activity	IBA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0008911	lactaldehyde dehydrogenase activity	IBA
GO:0043085	positive regulation of catalytic activity	AnnotationPropagation	P	GO:0008047	enzyme activator activity	IBA
GO:0016310	phosphorylation	AnnotationPropagation	P	GO:0035299	inositol pentakisphosphate 2-kinase activity	IBA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0003959	NADPH dehydrogenase activity	IBA
GO:0032259	methylation	AnnotationPropagation	P	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	IBA
GO:0006259	DNA metabolic process	AnnotationPropagation	P	GO:0004531	deoxyribonuclease II activity	IBA
GO:0090305	nucleic acid phosphodiester bond hydrolysis	AnnotationPropagation	P	GO:0004531	deoxyribonuclease II activity	IBA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0047134	protein-disulfide reductase activity	IBA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0004497	monooxygenase activity	IBA
GO:0043085	positive regulation of catalytic activity	AnnotationPropagation	P	GO:0008047	enzyme activator activity	IBA
GO:0032259	methylation	AnnotationPropagation	P	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	IBA
GO:0006508	proteolysis	AnnotationPropagation	P	GO:0004197	cysteine-type endopeptidase activity	IBA
GO:0006412	translation	AnnotationPropagation	P	GO:0003746	translation elongation factor activity	IBA
GO:0006414	translational elongation	AnnotationPropagation	P	GO:0003746	translation elongation factor activity	IBA
GO:0016311	dephosphorylation	AnnotationPropagation	P	GO:0008195	phosphatidate phosphatase activity	IBA