GO:0006355	regulation of transcription, DNA-templated	AnnotationPropagation	P	GO:0003700	DNA binding transcription factor activity	NAS
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0070184	mitochondrial tyrosyl-tRNA aminoacylation	ISO
GO:0006355	regulation of transcription, DNA-templated	AnnotationPropagation	P	GO:0003700	DNA binding transcription factor activity	ISS
GO:0006508	proteolysis	AnnotationPropagation	P	GO:0004190	aspartic-type endopeptidase activity	ISS
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0070125	mitochondrial translational elongation	ISM
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0003862	3-isopropylmalate dehydrogenase activity	IDA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0070125	mitochondrial translational elongation	ISM
GO:0006355	regulation of transcription, DNA-templated	AnnotationPropagation	P	GO:0003700	DNA binding transcription factor activity	IDA
GO:0006355	regulation of transcription, DNA-templated	AnnotationPropagation	P	GO:0003700	DNA binding transcription factor activity	ISS
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0004729	oxygen-dependent protoporphyrinogen oxidase activity	ISS
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0070125	mitochondrial translational elongation	ISM
GO:0006355	regulation of transcription, DNA-templated	AnnotationPropagation	P	GO:0003700	DNA binding transcription factor activity	ISS
GO:0006750	glutathione biosynthetic process	AnnotationPropagation	P	GO:0004363	glutathione synthase activity	NAS
GO:0007010	cytoskeleton organization	AnnotationPropagation	P	GO:0005200	structural constituent of cytoskeleton	NAS
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0070125	mitochondrial translational elongation	ISM
GO:0005623	cell	AnnotationPropagation	C	GO:0006879	cellular iron ion homeostasis	NAS
GO:0016575	histone deacetylation	AnnotationPropagation	P	GO:0004407	histone deacetylase activity	ISS
GO:0005623	cell	AnnotationPropagation	C	GO:0006878	cellular copper ion homeostasis	IMP
GO:0005623	cell	AnnotationPropagation	C	GO:0006879	cellular iron ion homeostasis	IMP
GO:0006355	regulation of transcription, DNA-templated	AnnotationPropagation	P	GO:0003700	DNA binding transcription factor activity	ISS
GO:0006355	regulation of transcription, DNA-templated	AnnotationPropagation	P	GO:0003700	DNA binding transcription factor activity	ISO
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0070125	mitochondrial translational elongation	ISM
GO:0035246	peptidyl-arginine N-methylation	AnnotationPropagation	P	GO:0016274	protein-arginine N-methyltransferase activity	ISS
GO:0006508	proteolysis	AnnotationPropagation	P	GO:0004175	endopeptidase activity	NAS
GO:0006508	proteolysis	AnnotationPropagation	P	GO:0070140	SUMO-specific isopeptidase activity	IDA
GO:0090501	RNA phosphodiester bond hydrolysis	AnnotationPropagation	P	GO:0004540	ribonuclease activity	ISS
GO:0016311	dephosphorylation	AnnotationPropagation	P	GO:0003993	acid phosphatase activity	IDA
GO:0005622	intracellular	AnnotationPropagation	C	GO:0016558	protein import into peroxisome matrix	IMP
GO:0005623	cell	AnnotationPropagation	C	GO:0016558	protein import into peroxisome matrix	IMP
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0008785	alkyl hydroperoxide reductase activity	ISS
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0050625	2-hydroxy-1,4-benzoquinone reductase activity	NAS
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0070125	mitochondrial translational elongation	ISM
GO:0061025	membrane fusion	AnnotationPropagation	P	GO:0005484	SNAP receptor activity	IGI
GO:0005622	intracellular	AnnotationPropagation	C	GO:0007234	osmosensory signaling via phosphorelay pathway	IMP
GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic	AnnotationPropagation	P	GO:0000213	tRNA-intron endonuclease activity	NAS
GO:0006508	proteolysis	AnnotationPropagation	P	GO:0004177	aminopeptidase activity	NAS
GO:0006355	regulation of transcription, DNA-templated	AnnotationPropagation	P	GO:0003700	DNA binding transcription factor activity	ISS
GO:0005623	cell	AnnotationPropagation	C	GO:0000132	establishment of mitotic spindle orientation	IMP
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0070125	mitochondrial translational elongation	ISM
GO:0000023	maltose metabolic process	AnnotationPropagation	P	GO:0032450	maltose alpha-glucosidase activity	IDA
GO:0022900	electron transport chain	AnnotationPropagation	P	GO:0009055	electron transfer activity	IMP
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0070125	mitochondrial translational elongation	ISM
GO:0006355	regulation of transcription, DNA-templated	AnnotationPropagation	P	GO:0003700	DNA binding transcription factor activity	ISS
GO:1903507	negative regulation of nucleic acid-templated transcription	AnnotationPropagation	P	GO:0003714	transcription corepressor activity	IGI
GO:0043085	positive regulation of catalytic activity	AnnotationPropagation	P	GO:0016532	superoxide dismutase copper chaperone activity	IMP
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0070125	mitochondrial translational elongation	ISM
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0047002	L-arabinitol 2-dehydrogenase activity	IDA
GO:0005622	intracellular	AnnotationPropagation	C	GO:0016558	protein import into peroxisome matrix	IMP
GO:0005623	cell	AnnotationPropagation	C	GO:0016558	protein import into peroxisome matrix	IMP
GO:0006355	regulation of transcription, DNA-templated	AnnotationPropagation	P	GO:0003700	DNA binding transcription factor activity	ISS
GO:0006355	regulation of transcription, DNA-templated	AnnotationPropagation	P	GO:0003700	DNA binding transcription factor activity	ISS
GO:0006355	regulation of transcription, DNA-templated	AnnotationPropagation	P	GO:0003700	DNA binding transcription factor activity	ISS
GO:0016575	histone deacetylation	AnnotationPropagation	P	GO:0004407	histone deacetylase activity	ISS
GO:0005622	intracellular	AnnotationPropagation	C	GO:0042147	retrograde transport, endosome to Golgi	IMP
GO:0005623	cell	AnnotationPropagation	C	GO:0042147	retrograde transport, endosome to Golgi	IMP
GO:0005829	cytosol	AnnotationPropagation	C	GO:0042147	retrograde transport, endosome to Golgi	IMP
GO:0005773	vacuole	AnnotationPropagation	C	GO:0007039	protein catabolic process in the vacuole	ISS
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0070125	mitochondrial translational elongation	ISM
GO:0006470	protein dephosphorylation	AnnotationPropagation	P	GO:0004722	protein serine/threonine phosphatase activity	NAS
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0070125	mitochondrial translational elongation	ISM
GO:0016311	dephosphorylation	AnnotationPropagation	P	GO:0003850	2-deoxyglucose-6-phosphatase activity	ISS
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0008823	cupric reductase activity	IMP
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0016655	oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	NAS
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0070125	mitochondrial translational elongation	ISM
GO:0043547	positive regulation of GTPase activity	AnnotationPropagation	P	GO:0005096	GTPase activator activity	IMP
GO:0006355	regulation of transcription, DNA-templated	AnnotationPropagation	P	GO:0003700	DNA binding transcription factor activity	ISS
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0004029	aldehyde dehydrogenase (NAD) activity	IMP
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0050353	trimethyllysine dioxygenase activity	IMP
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0070125	mitochondrial translational elongation	ISM
GO:0006355	regulation of transcription, DNA-templated	AnnotationPropagation	P	GO:0003700	DNA binding transcription factor activity	ISS
GO:0006355	regulation of transcription, DNA-templated	AnnotationPropagation	P	GO:0003700	DNA binding transcription factor activity	ISS
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0003942	N-acetyl-gamma-glutamyl-phosphate reductase activity	ISS
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0008336	gamma-butyrobetaine dioxygenase activity	IMP
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0008941	nitric oxide dioxygenase activity	ISS
GO:0006355	regulation of transcription, DNA-templated	AnnotationPropagation	P	GO:0003700	DNA binding transcription factor activity	ISS
GO:0006355	regulation of transcription, DNA-templated	AnnotationPropagation	P	GO:0003700	DNA binding transcription factor activity	ISS
GO:0006412	translation	AnnotationPropagation	P	GO:0033420	CUG codon-amino acid adaptor activity	ISS
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0008823	cupric reductase activity	IMP
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0070125	mitochondrial translational elongation	ISM
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0070125	mitochondrial translational elongation	ISM
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0070125	mitochondrial translational elongation	ISM
GO:0005623	cell	AnnotationPropagation	C	GO:0006878	cellular copper ion homeostasis	IMP
GO:0006355	regulation of transcription, DNA-templated	AnnotationPropagation	P	GO:0003700	DNA binding transcription factor activity	IMP
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0009013	succinate-semialdehyde dehydrogenase [NAD(P)+] activity	NAS
GO:0006355	regulation of transcription, DNA-templated	AnnotationPropagation	P	GO:0003700	DNA binding transcription factor activity	ISS
GO:0015914	phospholipid transport	AnnotationPropagation	P	GO:0008526	phosphatidylinositol transporter activity	ISS
GO:0006508	proteolysis	AnnotationPropagation	P	GO:0008233	peptidase activity	NAS
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0070125	mitochondrial translational elongation	ISM
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0018456	aryl-alcohol dehydrogenase (NAD+) activity	NAS
GO:0006355	regulation of transcription, DNA-templated	AnnotationPropagation	P	GO:0003700	DNA binding transcription factor activity	ISS
GO:1902600	proton transmembrane transport	AnnotationPropagation	P	GO:0015495	gamma-aminobutyric acid:proton symporter activity	NAS
GO:0003333	amino acid transmembrane transport	AnnotationPropagation	P	GO:0015495	gamma-aminobutyric acid:proton symporter activity	NAS
GO:0015812	gamma-aminobutyric acid transport	AnnotationPropagation	P	GO:0015495	gamma-aminobutyric acid:proton symporter activity	NAS
GO:0006470	protein dephosphorylation	AnnotationPropagation	P	GO:0004722	protein serine/threonine phosphatase activity	NAS
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0004460	L-lactate dehydrogenase (cytochrome) activity	NAS
GO:0035350	FAD transmembrane transport	AnnotationPropagation	P	GO:0015230	FAD transmembrane transporter activity	ISS
GO:0007010	cytoskeleton organization	AnnotationPropagation	P	GO:0005200	structural constituent of cytoskeleton	ISS
GO:1902358	sulfate transmembrane transport	AnnotationPropagation	P	GO:0015116	sulfate transmembrane transporter activity	NAS
GO:0016311	dephosphorylation	AnnotationPropagation	P	GO:0016791	phosphatase activity	IDA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0004043	L-aminoadipate-semialdehyde dehydrogenase activity	IDA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0070125	mitochondrial translational elongation	ISM
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0070125	mitochondrial translational elongation	ISM
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0008941	nitric oxide dioxygenase activity	ISS
GO:0006412	translation	AnnotationPropagation	P	GO:0003747	translation release factor activity	ISS
GO:0006415	translational termination	AnnotationPropagation	P	GO:0003747	translation release factor activity	ISS
GO:0006357	regulation of transcription by RNA polymerase II	AnnotationPropagation	P	GO:0000982	transcription factor activity, RNA polymerase II proximal promoter sequence-specific DNA binding	IMP
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0016491	oxidoreductase activity	NAS
GO:0006355	regulation of transcription, DNA-templated	AnnotationPropagation	P	GO:0003700	DNA binding transcription factor activity	ISS
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0070125	mitochondrial translational elongation	ISM
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0016491	oxidoreductase activity	ISS
GO:0006508	proteolysis	AnnotationPropagation	P	GO:0004190	aspartic-type endopeptidase activity	IDA
GO:0005773	vacuole	AnnotationPropagation	C	GO:0007039	protein catabolic process in the vacuole	ISS
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0070125	mitochondrial translational elongation	ISM
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0070125	mitochondrial translational elongation	ISM
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0004362	glutathione-disulfide reductase activity	IDA
GO:0098869	cellular oxidant detoxification	AnnotationPropagation	P	GO:0004362	glutathione-disulfide reductase activity	IDA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0018685	alkane 1-monooxygenase activity	IDA
GO:0005623	cell	AnnotationPropagation	C	GO:0033212	iron assimilation	IMP
GO:0005622	intracellular	AnnotationPropagation	C	GO:0042147	retrograde transport, endosome to Golgi	IMP
GO:0005623	cell	AnnotationPropagation	C	GO:0042147	retrograde transport, endosome to Golgi	IMP
GO:0005829	cytosol	AnnotationPropagation	C	GO:0042147	retrograde transport, endosome to Golgi	IMP
GO:0006412	translation	AnnotationPropagation	P	GO:0033428	CAG codon-amino acid adaptor activity	ISM
GO:0006508	proteolysis	AnnotationPropagation	P	GO:0004190	aspartic-type endopeptidase activity	IDA
GO:0043666	regulation of phosphoprotein phosphatase activity	AnnotationPropagation	P	GO:0019888	protein phosphatase regulator activity	ISS
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0004448	isocitrate dehydrogenase activity	NAS
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0050142	nitrogenase (flavodoxin) activity	ISS
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0070125	mitochondrial translational elongation	ISM
GO:0006468	protein phosphorylation	AnnotationPropagation	P	GO:0004674	protein serine/threonine kinase activity	ISS
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0070125	mitochondrial translational elongation	ISM
GO:1903826	arginine transmembrane transport	AnnotationPropagation	P	GO:0015181	arginine transmembrane transporter activity	NAS
GO:0043547	positive regulation of GTPase activity	AnnotationPropagation	P	GO:0005096	GTPase activator activity	NAS
GO:0005623	cell	AnnotationPropagation	C	GO:0045454	cell redox homeostasis	IMP
GO:0032508	DNA duplex unwinding	AnnotationPropagation	P	GO:0003678	DNA helicase activity	IDA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0018456	aryl-alcohol dehydrogenase (NAD+) activity	NAS
GO:0106005	RNA 5'-cap (guanine-N7)-methylation	AnnotationPropagation	P	GO:0004482	mRNA (guanine-N7-)-methyltransferase activity	IMP
GO:0080009	mRNA methylation	AnnotationPropagation	P	GO:0004482	mRNA (guanine-N7-)-methyltransferase activity	IMP
GO:0006370	7-methylguanosine mRNA capping	AnnotationPropagation	P	GO:0004482	mRNA (guanine-N7-)-methyltransferase activity	IMP
GO:0006355	regulation of transcription, DNA-templated	AnnotationPropagation	P	GO:0003700	DNA binding transcription factor activity	ISS
GO:0006508	proteolysis	AnnotationPropagation	P	GO:0004190	aspartic-type endopeptidase activity	IDA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0004470	malic enzyme activity	NAS
GO:1902600	proton transmembrane transport	AnnotationPropagation	P	GO:0015386	potassium:proton antiporter activity	IMP
GO:0071805	potassium ion transmembrane transport	AnnotationPropagation	P	GO:0015386	potassium:proton antiporter activity	IMP
GO:0035672	oligopeptide transmembrane transport	AnnotationPropagation	P	GO:0035673	oligopeptide transmembrane transporter activity	NAS
GO:0006508	proteolysis	AnnotationPropagation	P	GO:0070140	SUMO-specific isopeptidase activity	IDA
GO:0055114	oxidation-reduction process	AnnotationPropagation	P	GO:0019170	methylglyoxal reductase (NADH-dependent) activity	IDA
GO:0005622	intracellular	AnnotationPropagation	C	GO:0006406	mRNA export from nucleus	ISS
GO:0005623	cell	AnnotationPropagation	C	GO:0006406	mRNA export from nucleus	ISS