*GAF summary* Found 373524 annotations in 373548 lines. *GAF Validation Summary* Errors are reported first. For rule GO_AR:0000003 (http://www.geneontology.org/GO.annotation_qc.shtml#GO_AR:0000003) Annotations to 'binding ; GO:0005488' and 'protein binding ; GO:0005515' should be made with IPI and an interactor in the 'with' field, there are 17 violations with type Warning. For rule GO_AR:0000006 (http://www.geneontology.org/GO.annotation_qc.shtml#GO_AR:0000006) IEP usage is restricted to terms from the Biological Process ontology, there are 5 violations with type Warning. For rule GO_AR:0000008 (http://www.geneontology.org/GO.annotation_qc.shtml#GO_AR:0000008) No annotations should be made to uninformative high level terms, there are 277 violations with type Warning. For rule GO_AR:0000017 (http://www.geneontology.org/GO.annotation_qc.shtml#GO_AR:0000017) IDA annotations must not have a With/From entry, there is one violation with type Warning. For rule GO_AR:0000018 (http://www.geneontology.org/GO.annotation_qc.shtml#GO_AR:0000018) IPI annotations require a With/From entry, there are 5 violations with type Warning. *GAF Prediction Summary* Found 1052 predictions, see prediction file for details. *Used Ontology Summary* go/extensions/go-gaf